Gene detail

Detailed information of Cxam_g4157.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170573904.1, tryptophan--tRNA ligase [Ruegeria atlantica]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q92SI9	Tryptophan--tRNA ligase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=trpS PE=3 SV=1
P67586	Tryptophan--tRNA ligase OS=Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M) OX=224914 GN=trpS PE=3 SV=1
P67587	Tryptophan--tRNA ligase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=trpS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024109	Family	Tryptophan-tRNA ligase, bacterial-type	Interproscan
IPR050203	Family	Tryptophan--tRNA ligase	Interproscan
IPR002306	Family	Tryptophan-tRNA ligase	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43766	TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004830	Molecular Function	tryptophan-tRNA ligase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006436	Biological Process	tryptophanyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01867	WARS, trpS; tryptophanyl-tRNA synthetase	EC:6.1.1.2	Transfer RNA biogenesis	ko03016	deepkoala