Gene detail

Detailed information of Cxam_g4191.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170327184.1, ADP-forming succinate--CoA ligase subunit beta [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q28U74	Succinate--CoA ligase [ADP-forming] subunit beta OS=Jannaschia sp. (strain CCS1) OX=290400 GN=sucC PE=3 SV=1
A4WNM6	Succinate--CoA ligase [ADP-forming] subunit beta OS=Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) OX=349102 GN=sucC PE=3 SV=1
A3PN13	Succinate--CoA ligase [ADP-forming] subunit beta OS=Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=sucC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08442	ATP-grasp_2	ATP-grasp domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005809	Family	Succinate--CoA ligase-like, beta subunit	Interproscan
IPR017866	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR013650	Domain	ATP-grasp fold, succinyl-CoA synthetase-type	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11815	SUCCINYL-COA SYNTHETASE BETA CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006104	Biological Process	succinyl-CoA metabolic process	Interproscan
GO:0042709	Cellular Component	succinate-CoA ligase complex	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01903	sucC; succinyl-CoA synthetase beta subunit	EC:6.2.1.5	Carbon fixation pathways in prokaryotes	ko00720	deepkoala