Gene detail

Detailed information of Cxam_g4245.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170327245.1, aspartate carbamoyltransferase catalytic subunit [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5LX75	Aspartate carbamoyltransferase catalytic subunit OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=pyrB PE=3 SV=1
Q163C5	Aspartate carbamoyltransferase catalytic subunit OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=pyrB PE=3 SV=2
A8LL75	Aspartate carbamoyltransferase catalytic subunit OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=pyrB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02729	OTCace_N	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Domain	Interproscan
PF00185	OTCace	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036901	Homologous_superfamily	Aspartate/ornithine carbamoyltransferase superfamily	Interproscan
IPR006132	Domain	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding	Interproscan
IPR002082	Family	Aspartate carbamoyltransferase	Interproscan
IPR006130	Family	Aspartate/ornithine carbamoyltransferase	Interproscan
IPR006131	Domain	Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45753	ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0016597	Molecular Function	amino acid binding	Interproscan
GO:0016743	Molecular Function	carboxyl- or carbamoyltransferase activity	Interproscan
GO:0004070	Molecular Function	aspartate carbamoyltransferase activity	Interproscan
GO:0006207	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00609	pyrB, PYR2; aspartate carbamoyltransferase catalytic subunit	EC:2.1.3.2	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala