Gene detail

Detailed information of Cxam_g4926.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: GJM44328.1, succinate dehydrogenase flavoprotein subunit [Gemmatimonadota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
D9PU00	Fumarate reductase (CoM/CoB) subunit A OS=Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg) OX=79929 GN=tfrA PE=1 SV=1
Q60356	Uncharacterized FAD-dependent oxidoreductase MJ0033 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0033 PE=3 SV=1
P0AC43	Succinate dehydrogenase flavoprotein subunit OS=Escherichia coli O157:H7 OX=83334 GN=sdhA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02910	Succ_DH_flav_C	Fumarate reductase flavoprotein C-term	Domain	Interproscan
PF00890	FAD_binding_2	FAD binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037099	Homologous_superfamily	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily	Interproscan
IPR030664	Family	FAD-dependent oxidoreductase SdhA/FrdA/AprA	Interproscan
IPR027477	Homologous_superfamily	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR015939	Domain	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal	Interproscan
IPR003953	Domain	FAD-dependent oxidoreductase 2, FAD binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0000104	Molecular Function	succinate dehydrogenase activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0009055	Molecular Function	electron transfer activity	Interproscan
GO:0009061	Biological Process	anaerobic respiration	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00239	sdhA, frdA; succinate dehydrogenase flavoprotein subunit	EC:1.3.5.1	Legionellosis	ko05134	deepkoala