Detailed information of Cxam_g4931.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBN2489678.1, phenylalanine--tRNA ligase subunit beta [Planctomycetota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O28848Phenylalanine--tRNA ligase beta subunit OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=pheT PE=3 SV=1
O26864Phenylalanine--tRNA ligase beta subunit OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=pheT PE=1 SV=2
Q2NGX9Phenylalanine--tRNA ligase beta subunit OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) OX=339860 GN=pheT PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17759tRNA_synthFbetaPhenylalanyl tRNA synthetase beta chain CLM domainDomainInterproscan
PF03484B5tRNA synthetase B5 domainDomainInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR005147DomaintRNA synthetase, B5-domainInterproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR041616DomainPhenylalanyl tRNA synthetase beta chain, core domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR005146DomainB3/B4 tRNA-binding domainInterproscan
IPR004096Domain4-vinyl reductase, 4VRInterproscan
IPR004531FamilyPhenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic typeInterproscan
IPR024096Homologous_superfamilyNO signalling/Golgi transport ligand-binding domain superfamilyInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR020578Binding_siteAminotransferase class-V, pyridoxal-phosphate binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11601CYSTEINE DESULFURYLASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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