Gene detail

Detailed information of Cxam_g5017.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170416461.1, succinate--CoA ligase subunit alpha [Ruegeria atlantica]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P53595	Malate--CoA ligase subunit alpha OS=Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) OX=272630 GN=mtkB PE=3 SV=2
O67547	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Aquifex aeolicus (strain VF5) OX=224324 GN=sucD PE=3 SV=1
P80865	Succinate--CoA ligase [ADP-forming] subunit alpha OS=Bacillus subtilis (strain 168) OX=224308 GN=sucD PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02629	CoA_binding	CoA binding domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR003781	Domain	CoA-binding	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR017440	Active_site	ATP-citrate lyase/succinyl-CoA ligase, active site	Interproscan
IPR005810	Family	Succinyl-CoA ligase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11117	SUCCINYL-COA LIGASE SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004775	Molecular Function	succinate-CoA ligase (ADP-forming) activity	Interproscan
GO:0004776	Molecular Function	succinate-CoA ligase (GDP-forming) activity	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0009361	Cellular Component	succinate-CoA ligase complex (ADP-forming)	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08692	mtkB; malate-CoA ligase subunit alpha	EC:6.2.1.9	Methane metabolism	ko00680	deepkoala