Gene detail

Detailed information of Cxam_g5040.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170328673.1, aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Ruegeria arenilitoris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
E1V7V7	Diaminobutyrate--2-oxoglutarate transaminase OS=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) OX=768066 GN=doeD PE=3 SV=1
B8BBZ7	Probable gamma-aminobutyrate transaminase 3, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=OsI_28220 PE=3 SV=1
Q6ZCF0	Probable gamma-aminobutyrate transaminase 3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0205900 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00202	Aminotran_3	Aminotransferase class-III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005814	Family	Aminotransferase class-III	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR049704	Conserved_site	Aminotransferases class-III pyridoxal-phosphate attachment site	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43094	AMINOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan