Detailed information of Cxam_g5127.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: CAH3019872.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V9R3DIS3-like exonuclease 2 OS=Xenopus tropicalis OX=8364 GN=dis3l2 PE=2 SV=2
Q8CI75DIS3-like exonuclease 2 OS=Mus musculus OX=10090 GN=Dis3l2 PE=1 SV=1
Q8IYB7DIS3-like exonuclease 2 OS=Homo sapiens OX=9606 GN=DIS3L2 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773RNBRNB domainDomainInterproscan
PF05960DUF885Bacterial protein of unknown function (DUF885)FamilyInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF17877Dis3l2_C_termDIS3-like exonuclease 2 C terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001900DomainRibonuclease II/RInterproscan
IPR010281FamilyProtein of unknown function DUF885Interproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR028591FamilyDIS3-like exonuclease 2Interproscan
IPR050180FamilyRNR RibonucleaseInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR041093DomainDIS3-like exonuclease 2, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0010587Biological ProcessmiRNA catabolic processInterproscan

TOP