Gene detail

Detailed information of Cxam_g515.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBN2490426.1, RNA 3'-phosphate cyclase [Planctomycetota bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4KEB8	RNA 3'-terminal phosphate cyclase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=rtcA PE=3 SV=2
A4XRJ0	RNA 3'-terminal phosphate cyclase OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=rtcA PE=3 SV=1
Q609M1	RNA 3'-terminal phosphate cyclase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=rtcA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01137	RTC	RNA 3'-terminal phosphate cyclase	Domain	Interproscan
PF05189	RTC_insert	RNA 3'-terminal phosphate cyclase (RTC), insert domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023797	Domain	RNA 3'-terminal phosphate cyclase domain	Interproscan
IPR000228	Family	RNA 3'-terminal phosphate cyclase	Interproscan
IPR037136	Homologous_superfamily	RNA 3'-terminal phosphate cyclase domain superfamily	Interproscan
IPR036553	Homologous_superfamily	RNA 3'-terminal phosphate cyclase, insert domain superfamily	Interproscan
IPR013792	Homologous_superfamily	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	Interproscan
IPR013791	Domain	RNA 3'-terminal phosphate cyclase, insert domain	Interproscan
IPR017770	Family	RNA 3'-terminal phosphate cyclase type 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11096	RNA 3' TERMINAL PHOSPHATE CYCLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003963	Molecular Function	RNA-3'-phosphate cyclase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01974	RTCA, rtcA; RNA 3'-terminal phosphate cyclase (ATP)	EC:6.5.1.4	Enzymes with EC numbers	-	deepkoala