Gene detail

Detailed information of Cxam_g5165.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: AFP87463.1, smad nuclear interacting protein 1-like protein, partial [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q8BIZ6	Smad nuclear-interacting protein 1 OS=Mus musculus OX=10090 GN=Snip1 PE=1 SV=1
Q5M9G6	Smad nuclear interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Snip1 PE=1 SV=1
Q8TAD8	Smad nuclear-interacting protein 1 OS=Homo sapiens OX=9606 GN=SNIP1 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	THAP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan
PF00498	FHA	FHA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR050923	Family	Cellular Process Regulator and RNA Processing Protein	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23308	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0035196	Biological Process	miRNA processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13108	SNIP1; smad nuclear-interacting protein 1	-	Spliceosome	ko03041	deepkoala