Detailed information of Cxam_g536.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170332135.1, histidine--tRNA ligase [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5LVN3Histidine--tRNA ligase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=hisS PE=3 SV=1
Q1GJD0Histidine--tRNA ligase OS=Ruegeria sp. (strain TM1040) OX=292414 GN=hisS PE=3 SV=1
A1B3C5Histidine--tRNA ligase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=hisS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13393tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041715DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR033656DomainHistidyl-anticodon-bindingInterproscan
IPR015807FamilyHistidine-tRNA ligaseInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR004516FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11476HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004821Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006427Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01892HARS, hisS; histidyl-tRNA synthetaseEC:6.1.1.21
Transfer RNA biogenesisko03016deepkoala

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