Gene detail

Detailed information of Cxam_g5427.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: KAJ7365987.1, WD repeat-containing protein 41 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q7T2F6	WD repeat and SOCS box-containing protein 1 OS=Danio rerio OX=7955 GN=wsb1 PE=2 SV=1
Q6P1V3	WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=wsb1 PE=2 SV=1
Q6NNP0	Autophagy-related protein 16 OS=Arabidopsis thaliana OX=3702 GN=ATG16 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR040102	Family	WD repeat-containing protein 41	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22805	WDR41-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan