Gene detail

Detailed information of Cxam_g5562.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170327843.1, FAD-linked oxidase C-terminal domain-containing protein [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0AEQ0	Glycolate oxidase subunit GlcD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=glcD PE=3 SV=1
P0AEP9	Glycolate oxidase subunit GlcD OS=Escherichia coli (strain K12) OX=83333 GN=glcD PE=1 SV=1
P94535	Glycolate oxidase subunit GlcD OS=Bacillus subtilis (strain 168) OX=224308 GN=glcD PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02913	FAD-oxidase_C	FAD linked oxidases, C-terminal domain	Domain	Interproscan
PF01565	FAD_binding_4	FAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR016171	Homologous_superfamily	Vanillyl-alcohol oxidase, C-terminal subdomain 2	Interproscan
IPR016164	Homologous_superfamily	FAD-linked oxidase-like, C-terminal	Interproscan
IPR051914	Family	FAD-linked Oxidoreductase/Transferase Type 4	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR004113	Domain	FAD-binding oxidoreductase/transferase, type 4, C-terminal	Interproscan
IPR006094	Domain	FAD linked oxidase, N-terminal	Interproscan
IPR016166	Domain	FAD-binding domain, PCMH-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42934	GLYCOLATE OXIDASE SUBUNIT GLCD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00104	glcD; glycolate dehydrogenase FAD-linked subunit	EC:1.1.99.14	Glyoxylate and dicarboxylate metabolism	ko00630	deepkoala