Gene detail

Detailed information of Cxam_g606.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170325907.1, carbamoyl-phosphate synthase large subunit [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8UDE9	Carbamoyl phosphate synthase large chain OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=carB PE=3 SV=2
Q92PZ4	Carbamoyl phosphate synthase large chain OS=Rhizobium meliloti (strain 1021) OX=266834 GN=carB PE=3 SV=1
O50236	Carbamoyl phosphate synthase large chain OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=carB PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02142	MGS	MGS-like domain	Domain	Interproscan
PF02787	CPSase_L_D3	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	Domain	Interproscan
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011607	Domain	Methylglyoxal synthase-like domain	Interproscan
IPR016185	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR033937	Domain	Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain	Interproscan
IPR005480	Domain	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	Interproscan
IPR006275	Family	Carbamoyl-phosphate synthase, large subunit	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR036914	Homologous_superfamily	Methylglyoxal synthase-like domain superfamily	Interproscan
IPR036897	Homologous_superfamily	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR005483	Domain	Carbamoyl-phosphate synthase large subunit, CPSase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0004088	Molecular Function	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006541	Biological Process	glutamine metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01955	carB, CPA2; carbamoyl-phosphate synthase large subunit	EC:6.3.5.5	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala