Gene detail

Detailed information of Cxam_g6870.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_028393580.1, uncharacterized protein LOC114517926 [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A2AX52	Collagen alpha-4(VI) chain OS=Mus musculus OX=10090 GN=Col6a4 PE=1 SV=2
A6NMZ7	Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2
Q8C6K9	Collagen alpha-6(VI) chain OS=Mus musculus OX=10090 GN=Col6a6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR050525	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR003645	Domain	Follistatin-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06238	COL6A; collagen type VI alpha	-	Glycosaminoglycan binding proteins	ko00536	deepkoala