Detailed information of Cxam_g689.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170325814.1, YebC/PmpR family DNA-binding transcriptional regulator [Ruegeria arenilitoris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1GFE0Probable transcriptional regulatory protein TM1040_1893 OS=Ruegeria sp. (strain TM1040) OX=292414 GN=TM1040_1893 PE=3 SV=2
Q5LUI2Probable transcriptional regulatory protein SPO1072 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=SPO1072 PE=3 SV=1
Q168H2Probable transcriptional regulatory protein RD1_2018 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) OX=375451 GN=RD1_2018 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01709Transcrip_regTACO1/YebC second and third domainFamilyInterproscan
PF20772TACO1_YebC_NTACO1/YebC protein N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048300DomainTACO1/YebC-like, second and third domainsInterproscan
IPR002876FamilyTranscriptional regulator TACO1-likeInterproscan
IPR017856Homologous_superfamilyIntegrase-like, N-terminalInterproscan
IPR026564Homologous_superfamilyTranscriptional regulator TACO1-like, domain 3Interproscan
IPR049083DomainTACO1/YebC-like, N-terminal domainInterproscan
IPR029072Homologous_superfamilyYebC-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12532UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan

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