Detailed information of Cxam_g7260.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: MBW2273484.1, valine--tRNA ligase [Deltaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q47NK0Valine--tRNA ligase OS=Thermobifida fusca (strain YX) OX=269800 GN=valS PE=3 SV=1
A8LVI6Valine--tRNA ligase OS=Salinispora arenicola (strain CNS-205) OX=391037 GN=valS PE=3 SV=1
A4X0V0Valine--tRNA ligase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / JCM 13857 / NBRC 105044 / CNB-440) OX=369723 GN=valS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR048044FamilyValine-tRNA ligase, actinomycetesInterproscan
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR022874FamilyValine-tRNA ligase, type 2Interproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR033705DomainValyl tRNA synthetase, anticodon-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01873VARS, valS; valyl-tRNA synthetaseEC:6.1.1.9
Transfer RNA biogenesisko03016deepkoala

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