Gene detail

Detailed information of Cxam_g792.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170400352.1, 3-deoxy-D-manno-octulosonic acid transferase [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A8LIR8	GTP 3',8-cyclase OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=moaA PE=3 SV=1
A1B4A2	GTP 3',8-cyclase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=moaA PE=3 SV=1
Q98MK6	GTP 3',8-cyclase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=moaA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13353	Fer4_12	4Fe-4S single cluster domain	Domain	Interproscan
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF04413	Glycos_transf_N	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)	Domain	Interproscan
PF06463	Mob_synth_C	Molybdenum Cofactor Synthesis C	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR038107	Homologous_superfamily	3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR039901	Family	3-deoxy-D-manno-octulosonic acid transferase	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR000385	Conserved_site	MoaA/NifB/PqqE, iron-sulphur binding, conserved site	Interproscan
IPR007507	Domain	3-deoxy-D-manno-octulosonic-acid transferase, N-terminal	Interproscan
IPR013483	Family	Molybdenum cofactor biosynthesis protein A	Interproscan
IPR010505	Domain	Molybdenum cofactor biosynthesis protein A-like, twitch domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42755	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0009245	Biological Process	lipid A biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0006777	Biological Process	Mo-molybdopterin cofactor biosynthetic process	Interproscan
GO:0019008	Cellular Component	obsolete molybdopterin synthase complex	Interproscan