Gene detail

Detailed information of Cxam_g7957.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_282170039.1, aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Ruegeria atlantica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O07587	Putative aspartate aminotransferase YhdR OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdR PE=3 SV=1
Q56232	Aspartate/prephenate aminotransferase OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=aspC PE=1 SV=1
P58350	Aspartate aminotransferase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=aatB PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004838	Binding_site	Aminotransferases, class-I, pyridoxal-phosphate-binding site	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42691	ASPARTATE AMINOTRANSFERASE YHDR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11358	yhdR; aspartate aminotransferase	EC:2.6.1.1	Amino acid related enzymes	ko01007	deepkoala