Gene detail

Detailed information of Cxam_g7971.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: WP_170402982.1, hydroxymethylbilane synthase [Ruegeria arenilitoris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A1B853	Porphobilinogen deaminase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=hemC PE=3 SV=1
Q98EI7	Porphobilinogen deaminase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=hemC PE=3 SV=1
A6WXJ2	Porphobilinogen deaminase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=hemC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01379	Porphobil_deam	Porphobilinogen deaminase, dipyromethane cofactor binding domain	Domain	Interproscan
PF03900	Porphobil_deamC	Porphobilinogen deaminase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000860	Family	Porphobilinogen deaminase	Interproscan
IPR022417	Domain	Porphobilinogen deaminase, N-terminal	Interproscan
IPR022418	Domain	Porphobilinogen deaminase, C-terminal	Interproscan
IPR036803	Homologous_superfamily	Porphobilinogen deaminase, C-terminal domain superfamily	Interproscan
IPR022419	Binding_site	Porphobilinogen deaminase, dipyrromethane cofactor binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11557	PORPHOBILINOGEN DEAMINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004418	Molecular Function	hydroxymethylbilane synthase activity	Interproscan
GO:0033014	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0018160	Biological Process	peptidyl-pyrromethane cofactor linkage	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006783	Biological Process	heme biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01749	hemC, HMBS; hydroxymethylbilane synthase	EC:2.5.1.61	Porphyrin metabolism	ko00860	deepkoala