Gene detail

Detailed information of Cxam_g8100.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_028405826.1, LOW QUALITY PROTEIN: pseudouridine-metabolizing bifunctional protein C1861.05-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9USY1	Pseudouridine-metabolizing bifunctional protein C1861.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1861.05 PE=3 SV=1
A7GCK7	Pseudouridine-5'-phosphate glycosidase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) OX=441772 GN=psuG PE=3 SV=1
A9BJN0	Pseudouridine-5'-phosphate glycosidase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=403833 GN=psuG PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04227	Indigoidine_A	Indigoidine synthase A like protein	Family	Interproscan
PF00294	PfkB	pfkB family carbohydrate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007342	Family	Pseudouridine-5'-phosphate glycosidase	Interproscan
IPR011611	Domain	Carbohydrate kinase PfkB	Interproscan
IPR029056	Homologous_superfamily	Ribokinase-like	Interproscan
IPR022830	Homologous_superfamily	Indigoidine synthase A-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42909	ZGC:136858	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004730	Molecular Function	pseudouridylate synthase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16330	K16330; pseudouridylate synthase / pseudouridine kinase	EC:4.2.1.70 EC:2.7.1.83	Pyrimidine metabolism	ko00240	deepkoala