Gene detail

Detailed information of Cxam_g8189.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: RCH90898.1, translation initiation factor eIF4A, partial [Rhizopus stolonifer]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A4QVP2	ATP-dependent RNA helicase eIF4A OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TIF1 PE=3 SV=1
Q0UU86	ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=TIF1 PE=3 SV=1
Q2HFP1	ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=TIF1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan