Detailed information of Cxam_g8398.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_047140408.1, interferon regulatory factor 5 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90871Interferon regulatory factor 8 OS=Gallus gallus OX=9031 GN=IRF8 PE=2 SV=1
P23611Interferon regulatory factor 8 OS=Mus musculus OX=10090 GN=Irf8 PE=1 SV=1
Q58DJ0Interferon regulatory factor 5 OS=Bos taurus OX=9913 GN=IRF5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00605IRFInterferon regulatory factor transcription factorDomainInterproscan
PF10401IRF-3Interferon-regulatory factor 3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019471DomainInterferon regulatory factor-3Interproscan
IPR001346DomainInterferon regulatory factor, DNA-binding domainInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR019817Conserved_siteInterferon regulatory factor, conserved siteInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11949INTERFERON REGULATORY FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0002376Biological Processimmune system processInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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