Detailed information of Cxam_g8486.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_001634432.2, transforming growth factor-beta receptor-associated protein 1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UR70Transforming growth factor-beta receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tgfbrap1 PE=1 SV=1
A7MB11Transforming growth factor-beta receptor-associated protein 1 OS=Bos taurus OX=9913 GN=TGFBRAP1 PE=2 SV=1
Q8WUH2Transforming growth factor-beta receptor-associated protein 1 OS=Homo sapiens OX=9606 GN=TGFBRAP1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan
PF01652IF4EEukaryotic initiation factor 4EDomainInterproscan
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF00780CNHCNH domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR001040FamilyTranslation Initiation factor eIF- 4eInterproscan
IPR023398Homologous_superfamilyTranslation Initiation factor eIF- 4e-likeInterproscan
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR019770Conserved_siteEukaryotic translation initiation factor 4E (eIF-4E), conserved siteInterproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

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