Detailed information of Cxam_g8690.t1 in Cassiopea xamachana

Genomic Location: :...
NR annotation: XP_047125739.1, uncharacterized protein LOC100199700 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6GMG6Solute carrier family 52, riboflavin transporter, member 3-B OS=Danio rerio OX=7955 GN=slc52a3b PE=2 SV=1
B5X4H8Riboflavin transporter 2 OS=Salmo salar OX=8030 GN=rft2 PE=2 SV=1
Q9D6X5Solute carrier family 52, riboflavin transporter, member 3 OS=Mus musculus OX=10090 GN=Slc52a3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF06237SLC52_ribofla_trSolute carrier family 52, riboflavin transporterFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR009357FamilySolute carrier family 52, riboflavin transporterInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12929SOLUTE CARRIER FAMILY 52Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0032217Molecular Functionriboflavin transmembrane transporter activityInterproscan
GO:0032218Biological Processriboflavin transportInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04600CELSR1; cadherin EGF LAG seven-pass G-type receptor 1-Cell adhesion moleculesko04515deepkoala

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