Detailed information of EGACTEQ4350001019-PA in Actinia equina

Genomic Location: WHPX01001322.1:178336...193580
NR annotation: XP_031568716.1, SMC5-SMC6 complex localization factor protein 1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12872Splicing factor, suppressor of white-apricot homolog OS=Homo sapiens OX=9606 GN=SFSWAP PE=1 SV=3
D3ZTQ1Splicing factor, suppressor of white-apricot homolog OS=Rattus norvegicus OX=10116 GN=Sfswap PE=1 SV=1
Q3USH5Splicing factor, suppressor of white-apricot homolog OS=Mus musculus OX=10090 GN=Sfswap PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF09750DRY_EERYAlternative splicing regulator DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF01805SurpSurp moduleFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR035967Homologous_superfamilySWAP/Surp superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357DomainBRCT domainInterproscan
IPR000061DomainSWAP/SurpInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR019147DomainSuppressor of white apricot, N-terminal domainInterproscan
IPR049936DomainDNA topoisomerase 2-binding protein 1, eighth BRCT domainInterproscan
IPR042479FamilySMC5-SMC6 complex localization factor protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46677SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:1990166Biological Processprotein localization to site of double-strand breakInterproscan
GO:2000781Biological Processpositive regulation of double-strand break repairInterproscan

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