Gene detail

Detailed information of EGACTEQ4350002489-PA in Actinia equina

Genomic Location: WHPX01001306.1:318722...331291
NR annotation: XP_031559110.1, flocculation protein FLO11-like [Actinia tenebrosa]
Species abbreviation AEQUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

EGACTEQ4350002489-PA

ATGATCAAGGGTAAGACCTCTTCGACTGGACTAGATGATGGGATCAAATACGTAGAAATACCTCGAGGATGGAAGCGAATCCTAGAAAATGATTCAATACACTACATCAGCCCAAGTAGTTATTGTCTGAAGTCTTACGAAAATGTAATAGAATACCTAACATCAGATGGAACTTGCAAGTGTGGGTTGGACTGTCCACTTCTCATTCAACatgttttcaattttgatgCAAGTGTTCGaaataaagagagagaaaatgcTTCCAAGGCATTTGGGACTGAGTCATCATGTAAGCTGTGTGAAAGCAATCGACTAAAAGGAAACCATAGATCAGAGCAGGGTCTAGCGGCAAGTCCATTGAATCAGACACTGAAACACAcagctaaaaaaaatattaagccTTCAACTTTTGATGGCACTCTGACGTCCAAGAAAGTTATTGGTCACTCTCGCACCAAATTAGACTCTCCAAAAGTGAAGAGATCGAAGAAGGCATCAAGTCCCTTTTCTGATGTTCCAAGTCCACCACCAATTCCAATAAGTAGCCCAGTACAAAATGTTCCAAATAATCTGGGTGCCAACCAAGGACCTCTTCCGAGCTTCGCAAGCATTGTTAGTAGCTCAAAATTTTTTAATCCAGGACCCAATAGAGGACCCTTGCATCCTACTGGTTCACTACCCTTAAAAACCAATGAACAGAATGCATTTGCTTTTCCGAAGCCTGTTTCAACTGCAGTAACATCACCTCCATCACCTGTTGTTACCACCTCATCTGCAACTATCTCTGCACAGGTCTCGGAGACAAATCAAAATCATCTAGAGAACTTGCCTGTGGTGAATAGAATTCTTGCACCAACAAAATCAACCCCAAGTGCTAGAGTTCTGGTTGGGGGTAACGCCAATACAGCAATTTCATCGGCATCATATATTTCTGTATCTAAAGCATCTAGTGTTTCAGTTCCTTTGACAACTGTAGCATCAATCATAAGCACACCTACATTACCTAGTTTATTTTCACCACTGGATGGGGCAGCAGTATCAACAGAGGCAGCCAAATTGCCTTTAAGGGCTATGTCTAAAGCAAAACCAAGAGTTAGATTACCAAGGGCAAAACCTAAGCCAAAAACAGATCAGAAAGCAGGTTCAAAATTGAAAGCGGCCAAAGGTCCTACCAAAGTTACTCCAACTATGTTGACTACTGTATCGTCCATGCAACCAACATTCCCGATACCTAGTTTGGCTGCTACTGCAGTGGTTTCTAGTCCTACGTCATCATACTGGCCAATGCCTCCATCATCAGTAATGGGCAATATTAACCAGGCACCTTATCAGACCTCTACTTTTAATCCTTTGAGCTCGACAGTTCCATGCACTCCTGCAAATCTAATTGGCATATCAACTGTCAATTCCTCAACTAACTCAACATTTGCTAGACATCAAGAGTCAGTTATACACGTGCAGTCCATTGCATCGTCTTCAATTCAGACATCACAGAATTACCAGAGTCAAGGTGTTAGATCACAGTCTTTAGCCCAAAGTGCCACAGGAGGAGGTAGTGTTCAAGCACAAGCTAGTGGCAGTCCTGTGGATGGAAAGGGTAGTACAGTGAGTCAAGTACTCACTGCTTCAATAAATTACCCTGTAGTAGCGACCCCTAGAATACAAGCCCAGGCAGGTATGATGTATGTTGCTGCCACACCTGGTGTCAATGTGTTTCCTTCAAACTATCCTTATATGGCAGCTTCAGTGCAACAGATGCAAACTTCTCAAGGCACATTTACTCAAACTCAGAATGCCAAGAGCTCTTTGGCTGTATCCACAATGGTCACTACCAGTCAGCAGCCTATGAATGTATCACAGGTTGTGATGTCAGAAGTGGGTGCCAGTCAAAACCAGGGAAAAGTCAGTTTCCAGGTTCCTGGAATGTATTTACAAGGAGCTGCTCCAAATCAGATGTTTCCTTTAAATTCACAAGGCTTCAACATGGGTCAGTATAAAGGAGCATATCAACTGCCTGGTGCAATGTATCAAGCTCCAGTACAGGGAGGTGCAATGACGTTCATAGCACCAAGTGCTGCTAAGGGAACATATCCCGGAGTCCAGGCACTTGCTACGGGTAACCTTGGTCAATTTGCATATCAAAATCCATATATGTTTGGAATTGCAGTCATGCAGTCTACAACCAACCAGGCAACAAGTGCTACAGTTACAAGTACTAGAAGCTCTCCTGCTTCTTCAACATCTGTCACTACATCCCTCCAGATGATACAACCACAGACTTTACAGAATCCTGCGGTTGCTGCAGCATTTGAATCTTTTGTTCCCATTGCACCGGCAGCTGGTGGACAAGGTCCAAGGTTTGCTCAGACATTAGCACACCTTGCTAGTGCATATAACACTTTCCCGTCACCAGGGATTCTTCAAGGTTCTAATGCGAATCAGATACAGCTGGCGTACCAGATGATGCAGATGGGCTCAAATCCAAATTCAGCACATCAGCAACAGATGGCGGGTTTGATTACATCTGATGTATCACTAAAGCACCCTATAACCCAATCTGTTAAGCAAAATCTATTGTCTTCAATGGCAGCAGCTGCAGTTACAACCAAAGGATCAACACAAGTGACCACTAAGCCTCAGTCAGTTACTCAGTCAGCTACCTCTACGATAACATCCCTTGCTCAAACAACAAGGGAAAATGCAGCAGGCATGAGGTCACCATACTCTACAGGAGATGCCATTTCCTCATCTTTATCCTCTCCGTCTTGTTCTACAGCTTTCTCGCCCCATACTACTGCATCTGTTTCAGCACAAAATACTCTGGCAGCTTATCAACTAAGTACTGATGGCTCATATGACCAAAGGACTTTACAAAGTCCACCTCGGAACCAAATTCCATCTATAACAACTAGCTCTGCAGCAGGATTTTGTAGCTCTACCAGGACTTCTCATCAGAGTACGAGCAGTGGGACAGGCCCTTCTAAGACCAGTACAAATACTCACGAGTCTCAAGTGTTGTCTCATTTTGAGCCTCGCAACTGCAATGCTAGTAAATCATCAATGAAAAGTATATTTTCCATGGCCAATGAAAAGGCCAGCTCAGTAGCATCAGAAAAATGCCAGGGTCCTGTGGTTACAGATTATAATGAACAGCCAAAATCTGCGAATTATGGCACATATTCATCAGATCAAACACAGAAATTGACAGTTGTTTCTCCGAATGGAAAAGATGCTGTGGCAAAAAAGCCTTCATTTGAGATAATTTCTCAACAACATCAACCCCCTATGTGTGATAGTAATAATGTAAGTCCTTTGAGAACTTCAAATTTTCCGGTTTCAACTGAGCACAGAAACTTAAGTATCAATAAGCCTTGTACGACAGGCAGTGTATTAAGTCCAACAGAAAGGCCTTCATTTATTAGTACAGAGAGAGAAGGTGGTTTAATACCTTCTGATTCTAAAACAGCTACCAGAACAGTAGTAGGAAATGACCCTGTAGCATTGAAACCAACTAAATATGAATCAGATGCCAATTACTATGCCACTAACCCACTACTCGGCATGAAACGATCATGTGAAGCCATTGAAGTTTATCCTGACCCTCCTGAAAGTACggactgtgatgatgatgaaaaagatgatTATTGTAGCTCAAATGAAGACTCTATGGAGAGGGATTCAATGCGTGATGATGGTTCTATGGAGACTGTTAGAGATCTCCGACAGCATGGTGATGATCAACATGTTGAAGACAAATTTCTCATCACCAATCAAGTACGGAATCCAACCAAAGACATGTACAATGGGGGATGTAATGAAGTTCTTAAGGaacaagaaatgaaaaatgagaatGTTGGAGTGAACATGAAGGCCAACCAGGCATTCCCACCAGCACCTTTTAGAACAGAAATGTTAGGAGAACTACCCATTACCCATGTGAGGCCACACTTTGATATTGGTGATGTGGTTTGGGCACAAGCAAGGGGCCTTCCATCTTGGCCTGGGCAGATTGTTGATGAGAGCAAAGTTGGTAAAGGAAGGGCAGATGAGGGAAAGAAATGGGTGATGTGGTTTGGAGACCACACCTTCAGTCAAGTTGAGGTAGATCGCCTCAAAACTCTCAGTGAAGGACTCAGAACGTTAGATGataaagcaagaaagaaaaaatacagAGCTAAAAAAGCCAGGATAAGTATGGAACAAGCTATTAATGAAGCTCTTGAAGAATTAGAAGTGAGAGAAAGATTAAAAGCAAAGCAAGGTATGCGAGCAAAGACCAAGAAAAAACGTCTTAGATGA

Transcript

EGACTEQ4350002489-PA

CACGAATCCAAATTCAACATGGCGGTTTTCTGTAAACTACTGAACTTCTTTTTCACTACAAAATACCTAGACTTCCTTGGAATTTAAGCCAGAAACCCCACCAGGAATTCCCCAGAGAGCTTGATAGATCACTTTTGTCCTGATTTAGTCGAAGAACATGTATCCCCAAGGCTAATAGCCCGACATTGCCATGGACGGTCTTCGGGCTTGATGTCTGGTGTATTTGGGCGCCTTCGATGGTGCATTGTTCACGTTCCCGCCACGTTGTGTGAACTTTTGAGCGCATAAATACTTTAGAATTGGACCGTATGTCTGTTGATGGATTACCATGATCAAGGGTAAGACCTCTTCGACTGGACTAGATGATGGGATCAAATACGTAGAAATACCTCGAGGATGGAAGCGAATCCTAGAAAATGATTCAATACACTACATCAGCCCAAGTAGTTATTGTCTGAAGTCTTACGAAAATGTAATAGAATACCTAACATCAGATGGAACTTGCAAGTGTGGGTTGGACTGTCCACTTCTCATTCAACatgttttcaattttgatgCAAGTGTTCGaaataaagagagagaaaatgcTTCCAAGGCATTTGGGACTGAGTCATCATGTAAGCTGTGTGAAAGCAATCGACTAAAAGGAAACCATAGATCAGAGCAGGGTCTAGCGGCAAGTCCATTGAATCAGACACTGAAACACAcagctaaaaaaaatattaagccTTCAACTTTTGATGGCACTCTGACGTCCAAGAAAGTTATTGGTCACTCTCGCACCAAATTAGACTCTCCAAAAGTGAAGAGATCGAAGAAGGCATCAAGTCCCTTTTCTGATGTTCCAAGTCCACCACCAATTCCAATAAGTAGCCCAGTACAAAATGTTCCAAATAATCTGGGTGCCAACCAAGGACCTCTTCCGAGCTTCGCAAGCATTGTTAGTAGCTCAAAATTTTTTAATCCAGGACCCAATAGAGGACCCTTGCATCCTACTGGTTCACTACCCTTAAAAACCAATGAACAGAATGCATTTGCTTTTCCGAAGCCTGTTTCAACTGCAGTAACATCACCTCCATCACCTGTTGTTACCACCTCATCTGCAACTATCTCTGCACAGGTCTCGGAGACAAATCAAAATCATCTAGAGAACTTGCCTGTGGTGAATAGAATTCTTGCACCAACAAAATCAACCCCAAGTGCTAGAGTTCTGGTTGGGGGTAACGCCAATACAGCAATTTCATCGGCATCATATATTTCTGTATCTAAAGCATCTAGTGTTTCAGTTCCTTTGACAACTGTAGCATCAATCATAAGCACACCTACATTACCTAGTTTATTTTCACCACTGGATGGGGCAGCAGTATCAACAGAGGCAGCCAAATTGCCTTTAAGGGCTATGTCTAAAGCAAAACCAAGAGTTAGATTACCAAGGGCAAAACCTAAGCCAAAAACAGATCAGAAAGCAGGTTCAAAATTGAAAGCGGCCAAAGGTCCTACCAAAGTTACTCCAACTATGTTGACTACTGTATCGTCCATGCAACCAACATTCCCGATACCTAGTTTGGCTGCTACTGCAGTGGTTTCTAGTCCTACGTCATCATACTGGCCAATGCCTCCATCATCAGTAATGGGCAATATTAACCAGGCACCTTATCAGACCTCTACTTTTAATCCTTTGAGCTCGACAGTTCCATGCACTCCTGCAAATCTAATTGGCATATCAACTGTCAATTCCTCAACTAACTCAACATTTGCTAGACATCAAGAGTCAGTTATACACGTGCAGTCCATTGCATCGTCTTCAATTCAGACATCACAGAATTACCAGAGTCAAGGTGTTAGATCACAGTCTTTAGCCCAAAGTGCCACAGGAGGAGGTAGTGTTCAAGCACAAGCTAGTGGCAGTCCTGTGGATGGAAAGGGTAGTACAGTGAGTCAAGTACTCACTGCTTCAATAAATTACCCTGTAGTAGCGACCCCTAGAATACAAGCCCAGGCAGGTATGATGTATGTTGCTGCCACACCTGGTGTCAATGTGTTTCCTTCAAACTATCCTTATATGGCAGCTTCAGTGCAACAGATGCAAACTTCTCAAGGCACATTTACTCAAACTCAGAATGCCAAGAGCTCTTTGGCTGTATCCACAATGGTCACTACCAGTCAGCAGCCTATGAATGTATCACAGGTTGTGATGTCAGAAGTGGGTGCCAGTCAAAACCAGGGAAAAGTCAGTTTCCAGGTTCCTGGAATGTATTTACAAGGAGCTGCTCCAAATCAGATGTTTCCTTTAAATTCACAAGGCTTCAACATGGGTCAGTATAAAGGAGCATATCAACTGCCTGGTGCAATGTATCAAGCTCCAGTACAGGGAGGTGCAATGACGTTCATAGCACCAAGTGCTGCTAAGGGAACATATCCCGGAGTCCAGGCACTTGCTACGGGTAACCTTGGTCAATTTGCATATCAAAATCCATATATGTTTGGAATTGCAGTCATGCAGTCTACAACCAACCAGGCAACAAGTGCTACAGTTACAAGTACTAGAAGCTCTCCTGCTTCTTCAACATCTGTCACTACATCCCTCCAGATGATACAACCACAGACTTTACAGAATCCTGCGGTTGCTGCAGCATTTGAATCTTTTGTTCCCATTGCACCGGCAGCTGGTGGACAAGGTCCAAGGTTTGCTCAGACATTAGCACACCTTGCTAGTGCATATAACACTTTCCCGTCACCAGGGATTCTTCAAGGTTCTAATGCGAATCAGATACAGCTGGCGTACCAGATGATGCAGATGGGCTCAAATCCAAATTCAGCACATCAGCAACAGATGGCGGGTTTGATTACATCTGATGTATCACTAAAGCACCCTATAACCCAATCTGTTAAGCAAAATCTATTGTCTTCAATGGCAGCAGCTGCAGTTACAACCAAAGGATCAACACAAGTGACCACTAAGCCTCAGTCAGTTACTCAGTCAGCTACCTCTACGATAACATCCCTTGCTCAAACAACAAGGGAAAATGCAGCAGGCATGAGGTCACCATACTCTACAGGAGATGCCATTTCCTCATCTTTATCCTCTCCGTCTTGTTCTACAGCTTTCTCGCCCCATACTACTGCATCTGTTTCAGCACAAAATACTCTGGCAGCTTATCAACTAAGTACTGATGGCTCATATGACCAAAGGACTTTACAAAGTCCACCTCGGAACCAAATTCCATCTATAACAACTAGCTCTGCAGCAGGATTTTGTAGCTCTACCAGGACTTCTCATCAGAGTACGAGCAGTGGGACAGGCCCTTCTAAGACCAGTACAAATACTCACGAGTCTCAAGTGTTGTCTCATTTTGAGCCTCGCAACTGCAATGCTAGTAAATCATCAATGAAAAGTATATTTTCCATGGCCAATGAAAAGGCCAGCTCAGTAGCATCAGAAAAATGCCAGGGTCCTGTGGTTACAGATTATAATGAACAGCCAAAATCTGCGAATTATGGCACATATTCATCAGATCAAACACAGAAATTGACAGTTGTTTCTCCGAATGGAAAAGATGCTGTGGCAAAAAAGCCTTCATTTGAGATAATTTCTCAACAACATCAACCCCCTATGTGTGATAGTAATAATGTAAGTCCTTTGAGAACTTCAAATTTTCCGGTTTCAACTGAGCACAGAAACTTAAGTATCAATAAGCCTTGTACGACAGGCAGTGTATTAAGTCCAACAGAAAGGCCTTCATTTATTAGTACAGAGAGAGAAGGTGGTTTAATACCTTCTGATTCTAAAACAGCTACCAGAACAGTAGTAGGAAATGACCCTGTAGCATTGAAACCAACTAAATATGAATCAGATGCCAATTACTATGCCACTAACCCACTACTCGGCATGAAACGATCATGTGAAGCCATTGAAGTTTATCCTGACCCTCCTGAAAGTACggactgtgatgatgatgaaaaagatgatTATTGTAGCTCAAATGAAGACTCTATGGAGAGGGATTCAATGCGTGATGATGGTTCTATGGAGACTGTTAGAGATCTCCGACAGCATGGTGATGATCAACATGTTGAAGACAAATTTCTCATCACCAATCAAGTACGGAATCCAACCAAAGACATGTACAATGGGGGATGTAATGAAGTTCTTAAGGaacaagaaatgaaaaatgagaatGTTGGAGTGAACATGAAGGCCAACCAGGCATTCCCACCAGCACCTTTTAGAACAGAAATGTTAGGAGAACTACCCATTACCCATGTGAGGCCACACTTTGATATTGGTGATGTGGTTTGGGCACAAGCAAGGGGCCTTCCATCTTGGCCTGGGCAGATTGTTGATGAGAGCAAAGTTGGTAAAGGAAGGGCAGATGAGGGAAAGAAATGGGTGATGTGGTTTGGAGACCACACCTTCAGTCAAGTTGAGGTAGATCGCCTCAAAACTCTCAGTGAAGGACTCAGAACGTTAGATGataaagcaagaaagaaaaaatacagAGCTAAAAAAGCCAGGATAAGTATGGAACAAGCTATTAATGAAGCTCTTGAAGAATTAGAAGTGAGAGAAAGATTAAAAGCAAAGCAAGGTATGCGAGCAAAGACCAAGAAAAAACGTCTTAGATGATAATCTTCCTTTAACAATGCTCAACTCTGGACCTGACATTACAAAAATGGGATGATTATTGATTGAGCTTGTACCTTAAAGATGATGCCGTCTTCAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9P267	Methyl-CpG-binding domain protein 5 OS=Homo sapiens OX=9606 GN=MBD5 PE=1 SV=3
B1AYB6	Methyl-CpG-binding domain protein 5 OS=Mus musculus OX=10090 GN=Mbd5 PE=2 SV=1
Q3TY92	Methyl-CpG-binding domain protein 6 OS=Mus musculus OX=10090 GN=Mbd6 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006077 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00855 all species →	PWWP	PWWP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000313 all species →	Domain	PWWP domain	Interproscan
IPR001739 all species →	Domain	Methyl-CpG DNA binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16112 all species →	METHYL-CPG BINDING PROTEIN, DROSOPHILA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010369 all species →	Cellular Component	chromocenter	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23219	MBD5; methyl-CpG-binding domain protein 5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.