Gene detail

Detailed information of EGACTEQ4350003718-PA in Actinia equina

Genomic Location: WHPX01000725.1:37769...56222
NR annotation: XP_031557713.1, stimulated by retinoic acid gene 6 protein-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350003718-PA

ATGGGCGTCCCAAATTGTCTTGTTGATGAGCACAAGTACGATCTTGGATGCTTGGCACCAGCTATTTTTATCATCGCTGTTTTGAGCTTCATGAGGAAGAGAGTTAAACTGAAGCCTGATTTATGGAATGGACGTCCAGCACTACCTGTCGCTGTAGATTTTCTAGGCGATCAAAGGTTCAGATTCATCATACCTTTTGCCTTTGGTGCAACCGCCGCTTCCGCCTTCAACATGTTTTTCGAAGCATCTGCTGCTTCAAAAGACCTGCAAGGATCCGCTTGGTCAAAAGCTTTTCGGGGAATACTAATGACCCTGGTATATGGCATCATCAACTACCCATACCTCGCTTGTCTTAATGCTGAATACAGGATCATTGGATACACGATGGGGCTGATTTACTCGTTTGTGAGATTTCTTGTAGATTTGTTTGTGTACTTTGGCTGCACTTTTGGCGAAAAAGATACACAGCAATTCAAAAAACTGAACATTGAGTACATATCGTATGAGAGAATCTTGACCAATATACCTGTGGTCGTCTGCACATTATTTCTTGTTGGAAGCTACTTCGTACTGTTGTTTAAGGAAATCAAGAAACTTCGTATTCAGGGACTTCTTGGATTTCGATATGTGCTGGAAAAAAAAGAAGCGACAACCATTAACCTGGCCGGCAAAACAGAGACAGTTCATGTTAACCTTCTGTTCTCTAATCAACTACACCAGGCAGGGAAAAGAGCACCTCACCAAAATGGCACCTGGTATGATTCACTGAAGAACTGGATATACGTCACACGCCCAGACTTCAAGTTCTCCACTCAGTTCCTGTCATCTTTTGTTGTGTCCTGTATATTTGTTTACCAGGTGACAGTTGAACTGTTAATGTTAGTAACATTTATAATCTCAATCTTAAAAGCGGATCTTAAAGAAACGTTAAGGGGAAATGCTGTTCGCAAAGCGATTTTCGTGGCTATACAACTATCAAAAGACTACTTGATTACATCTGTATTATTGGCCTGTCTTTTTGCAATAATGCAACTGGGTTTTTTCATAAGAAGTCACAGAAATGATGTCCTTAAAACATATAGAACGAGAACGGGGCTGCTACCAGATGAAATTCTTCACCCAAAAATGCTTGTTGGCAAGAGTCTTCGCTTCTGTGGATACCAGATTGCATTTACCGCTGTTGgtcTTCTTGTCAACATGATTTCTGTATTTGCCCTTCTTTTGCCAATATACATATTACATCTGCTCTCCAAGTTTGAAACTGTCGATGTAATCTTATGGATCAAAAACTTAATCCTCGACATCCTGCCCTACATCATCACTCCCATATTGGTTTGGATATCGCTGATTCTTCTATCGCATATCGTATTCAAAGACCACACCTACCCAGATATCTCAATTACCATCAATAACAGGCGCCTGTTCGGCATCATGTcatacttcttcttctttttcaacaTCCTTGTCGGCTTATGGGCGGGCTTGCTTCGTGTTGTGAAAGGAGCAGTGATCGGGTTGGTATACCTGCCTCGAGTAGATCGTACCATTATGATGAGGGGATATCGGAAATTCGACAAAGCTTACATGGCCTACATTGGATTCCTTAGTGTACTTGTGGCTTTCAAACACCCTGTTATGCTATGTTTCTGTCAGTTGCTTCTTGAAGGAGTACACGGAAGAGAAACAgGTTCAAAAACCTTCCCTAGAAGGCCTCGTGTTTCTGGCAAGGCTTTGAACCGTTGGTTTCTTGCGGTGCTGCTCGTGCGTAACCCAAGCCTCGTGCGTTACCGAAAACAGGGTGACCGTATTGTTTTAAAGTTGCTTTCCACAAGTGACATAGGTGACttgctcaaacaaagaaaaacctacacctacacctacacctacaccggctacacctacacctacacctacaccggCTACACCTACATCTCCACCTACACCGGCTACACCTACACTGGCTACACCGGCTACACCTACACTTACGCCGGCTACACCTACACCggctacacctacacctacgtATACACCGGCTACACCTACACTGGCTACATCTACACCTATGCCTACACTGGCTACACCTACACTGGCTACACCcgctacacctacacctacaccggCTACACCTACACTTACACCTACACCGGCTATACCTACACTTACACCTACACCGGCTACACCTACACCAGCTACACCTACACCGGCTACACCCACACTGGCTACACCTACACCGGGTACACCTACACCGGCTACACCTACCCCAGCTACACCTACACCGGGTACACCTACACCGGCTACACCTACACTGGCTACACCTACACTGGCTACACCTACACTGGCTACACCTACACCGGCTACACCTACCCCTACACCggctacacctacacctacacctacaccggCTACACCTACACCGGCTACACCTACACCGGCTACACCTACACCGGCTACACCTACACCGGCTACACCTACACCGGCTACACCTACACCGGCTACACCTACACCGGCTACACCTACGCCGGCTACACCTACGCCGGCTACACCTACGCCGGCTACACCTAG

Transcript

EGACTEQ4350003718-PA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14752	RBP_receptor	Retinol binding protein receptor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026612	Family	Receptor for retinol uptake STRA6-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21444	COILED-COIL DOMAIN-CONTAINING PROTEIN 180	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0034632	Molecular Function	retinol transmembrane transporter activity	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0071939	Biological Process	vitamin A import into cell	Interproscan