Gene detail

Detailed information of EGACTEQ4350004032-PA in Actinia equina

Genomic Location: WHPX01000883.1:218312...232950
NR annotation: XP_031549501.1, E3 ubiquitin-protein ligase RNF220-like isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350004032-PA

AGCAAGGACTTCGGCAGCTGCAAGCTTCTACTGCAGAAGCCACACACCCGACAGCTTCATCACCAAGTTCTATCAGTGACTACCATGCTCAATACTCTTCCTCCAATAGCAGGTTCATTGATGGAGACACTCTTCATAGGATGGTATTGAGCACTTCTCCCTATCAGCATCGCCCCTCGCACCTATCTTTGTATCACAGTCAACAAACCAGTGAACGTTACTCTGACAGAGTTTCTCCCGACTACAACCCTCATTATTTCCAGATTCATTCTCACTTGGGAAGTGGATTATTACACAAGACTTCAGGACCAACTGCAGTTTTTAATGGTACCAGTGCATTCAGAAGGATTAGCCCTCATGAACATAGCTTTTCTTTCATCAGTTGCAGCATCAGAGAAGTTTGTTAGAAAGAGAACATAGTTTTGAGAGTCTTTACCACAAGCGCTCATCCTTGGACCTTGAAAGTGAGCGTGAAAGAATGAGCAAGGATAAAGTGTCTCCCCAAGTTACTGATAGAGAAATGGGAGAATACACTAATAATACTGACCACTCCCCAAATGCAAGCCCTCGCAGTACTCACTCCACTGAAAGCAGCGAAAACAACCCAAGATTTGATACAGTGAAGgttaaacaagaaaaagaagatatcAAAGAGTGCTGTGAAATTGCTGTTGATGAAAACCAGGCTGATGGCAACAGAAGAACCAAAGCCAAAAAGTCAGGGAAAACCCCTTGCTGTCCAGTATGTGGGATAACCATTAGACCTGGAGAGATGGAAAGTCATTTTGCTTGGGAAATGGAAAAGGCAAATGAAGAGATGAGAAAAACCAGAAGAAGTCAACGAGAATCTTCTATTCAAGCCAGAAAAGGTCACATTACAAACAAGAGAGTAAAGCAAGAGAATGAACTTGGCATCCCACATGATGACACTCCTGCCAGTACTAGACACCAGACATACCTCAGAGTGTGTGCAAATAGAATGGCCAGAACAGGTCATGGTTCAAAGTCTACAAGATCAAGAAGTGCACAGAGTTCTCCTGTCAACCCATCCTACTTGCTTGATAAGAATGATGAAGGTCCATCAGGGGTAAGATCAGCAACATGTCCAGTGTGCGAGTCAGTTATCCATGGAAGTGGAGAGGAACTCAACTCTCATGTCGAAGCTTGTCTAAGAAAGAGAGATGGTAATGAAGAAGTTAATGGTCAAGCAACGTTTGATGAGTATGAGTGGGCAGGCCAGACAAGAATACGTGCTACTTCTTTGCTAGAGGGTGGCTTCAAAGCTTCAGGGTTCCAAACTGGTATCAAGAGAAAGAATGCAGAAGATGATGGTGACTTGAATATCGATGGTGATGACTCAGAAGAATATGGCAAAGCTCAATACAGTGAAAGTGATATCATACCCTGTAGTGCAGATGAACCTGCAGAAGATCGTGCACGACAGGCCCTAAGAGGAGCAGTTTTAAGTGGTGAGAACTCTCCTGCTTCCAGAAGTACACCTACAAGAAGTCGCTGGTCTGAAGACGAAGGAGATGCTAATCACTCATCAGATGAGAAAACATCTCCCAAAGATGAGAAGGAAGACATTGAAGAAGGGTCTAATCAGCGTCTTGTTATTAACTCACTCAAAAGTAGAGTCAAGGATTTGGTAAGTCACCTTTTTTGTGGCATGGGTGCGgtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcGGTATCTAGGGGCATGGGTGCGGTATCTAGGGGCATGGGTGCGGTATCTAGGGCATGGGTGCGGTATCTAGGGGCATGGGTGCGgtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatgggtgcggtatctagtggcatggtgcggtatctag

Protein

Uniprot

Uniprot term	Description
Q5VTB9	E3 ubiquitin-protein ligase RNF220 OS=Homo sapiens OX=9606 GN=RNF220 PE=1 SV=1
Q08DV5	E3 ubiquitin-protein ligase RNF220 OS=Bos taurus OX=9913 GN=RNF220 PE=2 SV=1
Q8HXD5	E3 ubiquitin-protein ligase RNF220 OS=Macaca fascicularis OX=9541 GN=RNF220 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15926	RNF220	E3 ubiquitin-protein ligase RNF220	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011049	Homologous_superfamily	Serralysin-like metalloprotease, C-terminal	Interproscan
IPR031824	Domain	E3 ubiquitin-protein ligase RNF220, middle domain	Interproscan
IPR052443	Family	E3 ubiquitin-protein ligase RNF220-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13459	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan