Detailed information of EGACTEQ4350004689-PA in Actinia equina

Genomic Location: WHPX01000544.1:917731...918411
NR annotation: KXJ07781.1, V(D)J recombination activating protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6J6I8Breast cancer type 1 susceptibility protein homolog OS=Gorilla gorilla gorilla OX=9595 GN=BRCA1 PE=3 SV=1
P38398Breast cancer type 1 susceptibility protein OS=Homo sapiens OX=9606 GN=BRCA1 PE=1 SV=2
Q9GKK8Breast cancer type 1 susceptibility protein homolog OS=Pan troglodytes OX=9598 GN=BRCA1 PE=2 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF12560RAG1_imp_bdRAG1 importin bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR024627FamilyV(D)J recombination-activating protein 1Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR035714DomainRAG1 importin-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11539VDJ RECOMBINATION ACTIVATING PROTEIN 1 RAG1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0002250Biological Processadaptive immune responseInterproscan
GO:0002331Biological Processpre-B cell allelic exclusionInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033151Biological ProcessV(D)J recombinationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097519Cellular ComponentDNA recombinase complexInterproscan
GO:1905347Cellular Componentendodeoxyribonuclease complexInterproscan
GO:1990238Molecular Functiondouble-stranded DNA endonuclease activityInterproscan

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