Gene detail

Detailed information of EGACTEQ4350005009-PA in Actinia equina

Genomic Location: WHPX01000353.1:5470...15127
NR annotation: XP_031566406.1, FYVE, RhoGEF and PH domain-containing protein 6-like [Actinia tenebrosa]
Species abbreviation AEQUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

EGACTEQ4350005009-PA

ATGGCGTCCATCGGATACAACAGTCCTTCAAGGACAAGAAACGCCAAGTTGCGTAGTGCCAAAAAGTTCCTGTCTTTGCAAGTGTCTCAGACAGGACAGGCCTTGTCAAAGGAAATGAATGGCATACTGCAAGCCCAAATAATGGCTAGGAAGCGCAAGAAGGTTATTAATGAGATATTCACCACAGAAAAGACTTACCAGCAACAGCTACACACCCTGACAACTATCTTCCTTGGAGAACTCAGAAATGCAAATATTGTACCACAAAGTGTCCTGAACACAATCTTTTCCAACATCGAAGGCATTGAAGCAATTAACAAAGAATTGCTGAACCACATGGAAACACTGGGTGTTGGCGATGCTTTCCTGGCCATGGCACCTTTCATCAAGCTTTACAGCACATATGCAAATAACTTTGAGCGTGCGAGTAACATGTTGCAGGAATGGGAGAAAAAATCCCCAGATTTTGTGTCATTCATAACAAGGCAAGAAGCAATGCAGGAATGCAAGGGACTGAACCTAAGAGCGTTGCTTATAACACCAGTACAACGAGTACCAAGGTATAAGCTGCTACTTGAGAGTTTGTTGAACAAAACACCAAGAGACTATCCAGATTTCAGCAAGCTTGAAGAGGCTACAGAAGAGATTGCAAAAGTTGCTGAAcacataaatgaaaatattcgcCAACatgaaaactttcaaaagatGCTTATGATACAGAAGAGCCTGACAGGAGAAGGCGCTCCAAAAATTCTAGCACCAgGAAGATTTTTCATCAAAGAAGGACCATTACTCAAGGCTTGCAAGCGTGGCTCACAAGAGAGGatgttctttctcttctctgaCATCCTCATCTATTCAAAAAAGAGTGGAACAGACAGAGATCAAAGTACGTACTCTTGTCGGCGTGTCTTCCCGTTAAATGAATGTGAAGTGGAGCAAATGTTTGGTAGTTCACTGGATACTGATGGAGCAGCAGACGTTGGGTCTCTCTTCAAGATATCGTGTCAAGACAAGACGCTTTTGGTGTACTCCAAGTCAAAACTAGAAGCTTCCTCTTGGTTTAATGCCATTAAAGACGCCATTGGGAAATTAAAGATTTGTCGTGCATCTTTGAGAAGGGTGAGTCGTGGTGACGGAAGTTTTGAGAAAACAGGAACACCACTGCGGCGCGCTGTCCTGCTGAAGAATAAGATTCTGAGAACAcccaaagaaatgaaaaacaagAAATCAGATTTCGATTGTTTGAGCCCGGCATCGTTCATCAAAGACAGTCTCTACCCGCTGAGAAAAGAAATGAGAACCAAAGCCATCCAAAATGAAGTCAAAAAAACCAACACTCCAAAACGATACACCAACAAGCTACCAGAACCAAACGCCAGGAAACAACAATGGACTTTGACCGAAAGCCAGGGGATAGACATGAACCACAATGCATCGGTAACTTCCTCTGCTGAAGACGATGTCACAGACGATGGCTCTTATGGCACAGAAGAATCTGCTTGTTACAATGAATTTGATGAATGTAGTAATCTTATTGGAACTGATGATGATTACGATGATGAGGAAGAGGAGGGTGAAAGAAGCTACGAACCAGCCACTCCAAGTGGTCTGATAGATTCTAACAGCCAAACAATGATTGACAACTCTGGAACACCCGCTGGCTCAATGTACGAATATTCAGATAGTGATGAGAGCTCGGATGATGAGGAGACTGAGGACGAATATACCGGAGTGTTGACACGTGGTCGTAAGAGGAAGATCAAAATCGACGAGAAAGAAAACCAGTTATACTCCTTCATTTCACCGAATCAACCAGCTCTGAAAAAGAGGTGCATTTTGCCGAGACTGTTATGTGGTGGTGAAAACCGTACGCCAAGGCGCAGCCTTGCTACGTCCAGTCCCGAGGCGAATGAGAGCGACACACGCTGGGTGCACGAGGCTTACGTTGACTGGGATATTCATTCAAAAATGACCGTTTTGAAAGAGAAACTCTATAGAACAGATGAATAA

Transcript

EGACTEQ4350005009-PA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7Z6J4	FYVE, RhoGEF and PH domain-containing protein 2 OS=Homo sapiens OX=9606 GN=FGD2 PE=1 SV=1
P98174	FYVE, RhoGEF and PH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FGD1 PE=1 SV=2
P52734	FYVE, RhoGEF and PH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fgd1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005931 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR051092 all species →	Family	FYVE, RhoGEF and PH domain-containing	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12673 all species →	FACIOGENITAL DYSPLASIA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005089 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for EGACTEQ4350005009-PA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.