Detailed information of EGACTEQ4350005133-PA in Actinia equina

Genomic Location: WHPX01000725.1:208643...228350
NR annotation: XP_031572097.1, E3 ubiquitin-protein ligase SHPRH-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q149N8E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens OX=9606 GN=SHPRH PE=1 SV=2
Q7TPQ3E3 ubiquitin-protein ligase SHPRH OS=Mus musculus OX=10090 GN=Shprh PE=1 SV=1
Q9UTL9Uncharacterized ATP-dependent helicase C144.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC144.05 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21325SHPRH_helical-1stE3 ubiquitin-protein ligase SHPRH, first helical domainDomainInterproscan
PF21324SHPRH_helical-2ndE3 ubiquitin-protein ligase SHPRH, second helical domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR048686DomainE3 ubiquitin-protein ligase SHPRH, first helical domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR048695DomainE3 ubiquitin-protein ligase SHPRH, second helical domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR052583FamilyATP-dependent Helicase/E3 Ubiquitin LigaseInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45865E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15710SHPRH; E3 ubiquitin-protein ligase SHPRHEC:5.6.2.-
EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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