Gene detail

Detailed information of EGACTEQ4350005550-PD in Actinia equina

Genomic Location: WHPX01001405.1:259557...266403
NR annotation: XP_031568036.1, recombining binding protein suppressor of hairless-like isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q91880	Suppressor of hairless protein homolog OS=Xenopus laevis OX=8355 GN=rbpj PE=1 SV=1
Q5RFK6	Recombining binding protein suppressor of hairless OS=Pongo abelii OX=9601 GN=RBPJ PE=2 SV=1
Q3SZ41	Recombining binding protein suppressor of hairless OS=Bos taurus OX=9913 GN=RBPJ PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	CSL

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09270	BTD	Beta-trefoil DNA-binding domain	Domain	Interproscan
PF09271	LAG1-DNAbind	LAG1, DNA binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015350	Domain	Beta-trefoil DNA-binding domain	Interproscan
IPR040159	Family	Suppressor of hairless-like	Interproscan
IPR037095	Homologous_superfamily	RBP-J/Cbf11, DNA binding domain superfamily	Interproscan
IPR015351	Domain	RBP-J/Cbf11/Cbf12, DNA binding	Interproscan
IPR036358	Homologous_superfamily	Beta-trefoil domain superfamily	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10665	RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001228	Molecular Function	DNA-binding transcription activator activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06053	RBPSUH, RBPJK; recombining binding protein suppressor of hairless	-	Transcription factors	ko03000	deepkoala