Gene detail

Detailed information of EGACTEQ4350006000-PA in Actinia equina

Genomic Location: WHPX01001176.1:517850...531988
NR annotation: XP_031564143.1, cilia- and flagella-associated protein 43-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350006000-PA

atGGATCAGTTTGGGACTTTGGAGCTCAGTTGGGCCCAAGGTTATGATGGTGGAACCTCAAGTTTTGTTGATAAAGATACATTATGTTTTGTGTGTGGAAATAATGTCAAATTCATTAACATCAAAGACAAGAGTCGATCATTTTTACCAACTCCTGGTGATGGGATTGGAGTGATTACTACAAACCCTGCATATAACTTGTATGCGTTCTCAGAATTGAAGGCCAATCCAAGGATCTTTATTTATTCGTTCCCTGATTTCAGTAGGCCTCGGGCAATACTTAAAGATGGTGCAAAGCTTAGCTACTCAGCATTAGCTTTTGCCAATAACAGTTCTATATTTGCCAGTTTTTCTGGTCTTCCAGACTTCCAGTTAACAATCTGGAATTGGGTGAATGGGCTTAAGCTTTGCTCAATCAATGTTGACCATCTGACATGCAATAACCTATCATTTAATCCTGTTAATTGGAGACAATTGTGTACAATTGGTAAAGAGATGCTGACCATTTGGCAAGTTGAGCAACTAAATGACAAATTCACTCTAACATCAAGtgaGTTCAAGCTGCCTCCTGCAGATGGAACCCCAGACGATGGAGAATTTGAAAACCTGAAGCATTCTATCAGTAGAATGGGAAGAGCTTTTACAACAGAAGAGTTCAGACTGACAAAAGCTGCCATTGCTGGCATTGTTGGTCATGAAGCTAAAGATTATGAACCAGGTGATAAGATAGAACGATGTGAGCCAGTTAGTCATTGCTGGACACCCAGTGGAATGATCTATTGTGGATGTTCTGGTGGACAGTTACTGAGGGTTGATCCTGATGTATATCAAATCAAAGTGGCTGCAACACCAAGGATGGGTACTCAGAGAAGCAGAACAGATACTTTATCACATCTAATACAGCACAAGAACACTATGGAATCACTTCCTGAAGAGGagGATGAGAACAATGATTCTGGTAATGGTTTGACCTATGGATCTACCAGTTGTCTAGCCCTTCACAAGTCTGGACTGTATGTCGGTGGACAGGATGGTATTCTGAGATGTTTGGACATTAATGGTCCTGAAGTCAAAGTTCTCAGTAAGACAGATACAGAAGCGCCAATCACTAGTCTTGCCTGGTCTTTTAACTACAATGAACTAGCTGTCGGCAGTACAAAGGGAAGCATACAAATGTATGAGCCCAATGACAATCTTCTTACCAAGCTGTTCGATATCAGTAATGTGGAATTTGTTGGTATAGATTGCTTACTTGGTGACTCCGAGTACTGTGTGACATGCAGGTCCAATGGTCTTCTCCAAGTATGGAATATTCAGACCTCTCTGTTTGCTGGTCAGTTACCTCTAGAATGCCATGTAACCTGTATAGCATGCTGTCCATCTTCCAGTACCGTAGCTGTCGGCACAGCCAGTGGTTCTGTGTACTTTATAGAACTGACATCAGTATCTCAACCACGCATTATTTTCTGTTCATACCTCCATCAAGGACCTGTGCTTCAGTTAAAATACGACATGGAAGGGCAGATCTTCGTCACAGGATCTAATGATGGTCATGTATTTGTTTGTGATGCAAGAGTTACCAACAACTTTAAAGTACTTGGCCATACAGAGGTCCCCGGTACTGTAATATCTATTTCTTGTCTCAATGCACGTGAAAATGATGGTCAAGGTCCATGGAAGATCGTCGTGGTTCACAGCCCCAATGATTCACATTCATGTGGGAATAACATGATCGAGTTTGAGGTTAACAAGGACATCCTTTATCGCAGTCCAAAAGATGCGTTTTTCAACAAAGCACTTCTGTATCGCCCTGAAGCAGTGAAGCTCTCTTCGCATAAGCTAACAGGACCTGTGTATAGTGTTGTTGTCACGTCACCACAGACGGCAATAGCTGTTGCTCATAATCGTAAAGAGTTAGTCAAGTTAGCATTGACTCAAGAGCAGGACAAGTCAAGCGCTATGCTGGAGCCTTTAGAATCTTACGTGGGACACGATCTTAATGGAGGGGAACTGGCATTATCCTGCCATCTGCGCTGGATTGCTAGTGCGGGAACAGATGGACAGATTATAGTCAGAGCTGTTGGGGCTTTGGACCGAATGCTAAAGATTCCTGGACATCATTACCGTAAGGGTGGAGTCAGTCACTTGTGTTTCACAGGAGATTCACAAAAACTACTAAGTACCGGAAGGGACGGGGTTTTATCATGCTGGGAATGGAGCTTTAGTGCCACAGGGAGAAGTAAGTCTACGACAGCGATCCAGGTATCACGAGCAAGAACAGCTCTTCTGAAAACCCAAAGACAAGATGAAGATGCAGCAGCCGCAGAAAGACCCAACTACATCCACAAGTCTGCTTCCGTCATAGAGAAAGAAAACACTGAAGGATCTGAAAAAGTCCAaaaaaagctggaaaaggaTGGGATATTCACTACACCTACGCCAACTTTGAGTGAAGACTCCACGTGGCTGCAGAAAGCTGTTGCGGAGGCCCAGCGAGAAGAAGACAAGAAGTTCGCAGACATCAAGCGAATGCTGCGCAAAGATATCTCCGAATTGCGCAACACAGTACTACAAATGATTGACGTGAACAGCCAGTTACCAGACATCGAGAAACTTGAGCGGCATGAGTTTAATATGGATGTGGAAGAACGGCAGAAACTGATCGCTGAAGGAGAAGAAAAGATCAAAGAGGTGCGTGATGAGATCGAGATCGCAAACCTCGCCCGTATCTACCTGAAGGAGATGATCAAACGAGAGTGTTGGGACGCCATGGTTGTCAAAGGTCGATCATGTAATTCTTTCCGTTTGTCCTTATCGGTCACTAACTACCCAATGCGAGAAAGATCAAAAGAAGAATTGGACGAGCTTCAATACGTCTTGACACAGAGGAAGATTGAGAAGGCAGAATATGAAGCGAGTAAGGACCTTGAGCCAGGCCCTACGTCATCTAGGAACACACCTATACCAGAGGACCGCCTAGATTACGAAGACGAAGACAACTTCATAGAAGACGAATGCAACAGCACAGGGACTAACCCAGCTACCTCGGGCAGCAGAGGAGCATCTTATGGTGGGGGTAGTGAGCAACTACAGAGTCAATTCCAGTTACACACTGCGCAACAGAAGTACAACCAAATTATCATGTTACAGGACGCCATTCATCGCATCAAAATCAACTTTAACAAAGAATTTGAAGAGACTTTCAAGTtcaaagaaaacgaaataaagaaaatccaGGAAAAGAATGATCGCATCAAGAAGATTCTTCACGACCTTGATATTGACGAAAAGATATTCCAGCCAGTAATGACAGACGATGAGTTACCTGAGAGACTTCTGCATGTCAAAGACCAAGAGGTCCCATTCGAGAGGTATATCACTGCTGAAGAACAGAAAAGATTAGATGAACAAGCTAAGGTGGAAGAAGAGAGGAGGTTAGCTGAGCAAGCAGATAATGCACGTGAACGtgcactgatgatgatgatgcagggTCGTCTTGAAGCCAACCTGGAGGATGAACTGAAGAAAGATCTGGTACCACCTGACTTTGTTACGGGTAAACCACAAGAAGAGTGGACGGAGGAAGAGCAGAAGGCGGCGAAAGACTTCGAAAAGATGGAAAAGCAACATTTAGAAGATCGAGAAAAGTGGAAGAAATCCCTCGAAACAGAGCTGAAAAAACTCCAGTCAAGTATCGCTGAAGCGACGACTGCTTTTGACGAAAAGCTCTCGTTACTCTTCCAAAAGAAAGTCAAAACAGAAATGGTTATCTATCAGGAAGAACTGAAGATATTCCGCCTTCTAGTCTCTATCTTGACGGAAGATGAACTCAGCACCCAAGAAGCAGAGCTCCTTCGTCGCATGGacgagaaaaaagagaagaaatctCGAGTGTCTTCGAGTCAGACTGAAGCCAAGAGAGAAGTGGATGACTTTCGCGAGGCGTATGAGCTCCTTGTGATGGAGGACAAGGCTTTAGACAAGGCATTCAAGAGGGAGTTTGGTGATCAGGACTTGCATACTGTGGAGCAACTGTACAAGCTGTTTAAAAGACGACCAAGAGGCCAGAAACAACTGCGCGCGGTCACGGATCCTCAAGCTGACGTTAAAACCGACTCTCCTTTCGCCCCAAGACCTTCCTCCTCTCGTGTTCATTCCGCTGCAGCAAAGCATTTAGCCAACGCCATGGAAGAGTTAGATAGTATAGAACATATGCCTGAAGGCTTGGAGCTGGAAGTATGGCAAAGGTTTATAGAAACGAGACGACAAAAGGTTGACAGTGAACAACAGGTAAAAGCCAAGGCTTTGGTGCTGGCAGAGATGAACTCGTATCTTCAAAAACGAATGGACGAAGACGAGAGAGTACAACACGACATGGAGCACACGTACCAGGAACTGCAGAGGCTGcgtaaagaaaaaatcaaatttctgaTCAATCTGGAAGTACAGCTTTTACTCAAGCAAGGCCAGGTTGAAGTTCCCCCTGGACCGTTTATTACTGACTATTCCGACAGTATTCTTGTTCACCGATCTGTAGTCGAGGATCTGAATGCGCAGATCACGAATCTTGGCAAAGCAAAAGTATCTATCATGGACGACAGTAAAGAATTTAGGAAAGGAATCCACGGTCTGGAATGGGAACATATGAAGATGCAGATGCAAGCAGAAGATCTGCAGACCAAAGCTAGAGATATCCAGCTATTGAGAGTAACCAAGGACCTCCAACAGTTTTTGACCGAGGGTGATCATCAAGCCCGTCAACAGAAGGAAATCGCTACGCTCGAGCAAACTTTATCATTGTTCCAAAAGATGCACGAGAGAAACGTGAATGACCGCAAAGAAACGATAAAAGGAATCAAACGAGTCATtcacaagaaagaaaaagataatacCAAACTAGACGGTGATCTAGAAGAACTGGCTTTATCTGTTGCCGAGCGACGCAACGTCAACGAGATGAATGCTGAAAGAAGAAATGACACCGGCGCAGAGCGTCGCTACCAAGACATCGTTGCGCGCCGTAAGCTGGTTGACTTGGCCAAAGCGCAAGCCTCAGAGATAGCAGTTCTAAGAGCGGAAGTGGAGCGACTACGCATGCGCACTTTCCCTGCTCTTGTTCAAGTCGAGCgctga

Transcript

EGACTEQ4350006000-PA

GTGAAAGTTTATCAATTTTGGTCTCggattttctcttgtttttccttttaaatGGATCAGTTTGGGACTTTGGAGCTCAGTTGGGCCCAAGGTTATGATGGTGGAACCTCAAGTTTTGTTGATAAAGATACATTATGTTTTGTGTGTGGAAATAATGTCAAATTCATTAACATCAAAGACAAGAGTCGATCATTTTTACCAACTCCTGGTGATGGGATTGGAGTGATTACTACAAACCCTGCATATAACTTGTATGCGTTCTCAGAATTGAAGGCCAATCCAAGGATCTTTATTTATTCGTTCCCTGATTTCAGTAGGCCTCGGGCAATACTTAAAGATGGTGCAAAGCTTAGCTACTCAGCATTAGCTTTTGCCAATAACAGTTCTATATTTGCCAGTTTTTCTGGTCTTCCAGACTTCCAGTTAACAATCTGGAATTGGGTGAATGGGCTTAAGCTTTGCTCAATCAATGTTGACCATCTGACATGCAATAACCTATCATTTAATCCTGTTAATTGGAGACAATTGTGTACAATTGGTAAAGAGATGCTGACCATTTGGCAAGTTGAGCAACTAAATGACAAATTCACTCTAACATCAAGtgaGTTCAAGCTGCCTCCTGCAGATGGAACCCCAGACGATGGAGAATTTGAAAACCTGAAGCATTCTATCAGTAGAATGGGAAGAGCTTTTACAACAGAAGAGTTCAGACTGACAAAAGCTGCCATTGCTGGCATTGTTGGTCATGAAGCTAAAGATTATGAACCAGGTGATAAGATAGAACGATGTGAGCCAGTTAGTCATTGCTGGACACCCAGTGGAATGATCTATTGTGGATGTTCTGGTGGACAGTTACTGAGGGTTGATCCTGATGTATATCAAATCAAAGTGGCTGCAACACCAAGGATGGGTACTCAGAGAAGCAGAACAGATACTTTATCACATCTAATACAGCACAAGAACACTATGGAATCACTTCCTGAAGAGGagGATGAGAACAATGATTCTGGTAATGGTTTGACCTATGGATCTACCAGTTGTCTAGCCCTTCACAAGTCTGGACTGTATGTCGGTGGACAGGATGGTATTCTGAGATGTTTGGACATTAATGGTCCTGAAGTCAAAGTTCTCAGTAAGACAGATACAGAAGCGCCAATCACTAGTCTTGCCTGGTCTTTTAACTACAATGAACTAGCTGTCGGCAGTACAAAGGGAAGCATACAAATGTATGAGCCCAATGACAATCTTCTTACCAAGCTGTTCGATATCAGTAATGTGGAATTTGTTGGTATAGATTGCTTACTTGGTGACTCCGAGTACTGTGTGACATGCAGGTCCAATGGTCTTCTCCAAGTATGGAATATTCAGACCTCTCTGTTTGCTGGTCAGTTACCTCTAGAATGCCATGTAACCTGTATAGCATGCTGTCCATCTTCCAGTACCGTAGCTGTCGGCACAGCCAGTGGTTCTGTGTACTTTATAGAACTGACATCAGTATCTCAACCACGCATTATTTTCTGTTCATACCTCCATCAAGGACCTGTGCTTCAGTTAAAATACGACATGGAAGGGCAGATCTTCGTCACAGGATCTAATGATGGTCATGTATTTGTTTGTGATGCAAGAGTTACCAACAACTTTAAAGTACTTGGCCATACAGAGGTCCCCGGTACTGTAATATCTATTTCTTGTCTCAATGCACGTGAAAATGATGGTCAAGGTCCATGGAAGATCGTCGTGGTTCACAGCCCCAATGATTCACATTCATGTGGGAATAACATGATCGAGTTTGAGGTTAACAAGGACATCCTTTATCGCAGTCCAAAAGATGCGTTTTTCAACAAAGCACTTCTGTATCGCCCTGAAGCAGTGAAGCTCTCTTCGCATAAGCTAACAGGACCTGTGTATAGTGTTGTTGTCACGTCACCACAGACGGCAATAGCTGTTGCTCATAATCGTAAAGAGTTAGTCAAGTTAGCATTGACTCAAGAGCAGGACAAGTCAAGCGCTATGCTGGAGCCTTTAGAATCTTACGTGGGACACGATCTTAATGGAGGGGAACTGGCATTATCCTGCCATCTGCGCTGGATTGCTAGTGCGGGAACAGATGGACAGATTATAGTCAGAGCTGTTGGGGCTTTGGACCGAATGCTAAAGATTCCTGGACATCATTACCGTAAGGGTGGAGTCAGTCACTTGTGTTTCACAGGAGATTCACAAAAACTACTAAGTACCGGAAGGGACGGGGTTTTATCATGCTGGGAATGGAGCTTTAGTGCCACAGGGAGAAGTAAGTCTACGACAGCGATCCAGGTATCACGAGCAAGAACAGCTCTTCTGAAAACCCAAAGACAAGATGAAGATGCAGCAGCCGCAGAAAGACCCAACTACATCCACAAGTCTGCTTCCGTCATAGAGAAAGAAAACACTGAAGGATCTGAAAAAGTCCAaaaaaagctggaaaaggaTGGGATATTCACTACACCTACGCCAACTTTGAGTGAAGACTCCACGTGGCTGCAGAAAGCTGTTGCGGAGGCCCAGCGAGAAGAAGACAAGAAGTTCGCAGACATCAAGCGAATGCTGCGCAAAGATATCTCCGAATTGCGCAACACAGTACTACAAATGATTGACGTGAACAGCCAGTTACCAGACATCGAGAAACTTGAGCGGCATGAGTTTAATATGGATGTGGAAGAACGGCAGAAACTGATCGCTGAAGGAGAAGAAAAGATCAAAGAGGTGCGTGATGAGATCGAGATCGCAAACCTCGCCCGTATCTACCTGAAGGAGATGATCAAACGAGAGTGTTGGGACGCCATGGTTGTCAAAGGTCGATCATGTAATTCTTTCCGTTTGTCCTTATCGGTCACTAACTACCCAATGCGAGAAAGATCAAAAGAAGAATTGGACGAGCTTCAATACGTCTTGACACAGAGGAAGATTGAGAAGGCAGAATATGAAGCGAGTAAGGACCTTGAGCCAGGCCCTACGTCATCTAGGAACACACCTATACCAGAGGACCGCCTAGATTACGAAGACGAAGACAACTTCATAGAAGACGAATGCAACAGCACAGGGACTAACCCAGCTACCTCGGGCAGCAGAGGAGCATCTTATGGTGGGGGTAGTGAGCAACTACAGAGTCAATTCCAGTTACACACTGCGCAACAGAAGTACAACCAAATTATCATGTTACAGGACGCCATTCATCGCATCAAAATCAACTTTAACAAAGAATTTGAAGAGACTTTCAAGTtcaaagaaaacgaaataaagaaaatccaGGAAAAGAATGATCGCATCAAGAAGATTCTTCACGACCTTGATATTGACGAAAAGATATTCCAGCCAGTAATGACAGACGATGAGTTACCTGAGAGACTTCTGCATGTCAAAGACCAAGAGGTCCCATTCGAGAGGTATATCACTGCTGAAGAACAGAAAAGATTAGATGAACAAGCTAAGGTGGAAGAAGAGAGGAGGTTAGCTGAGCAAGCAGATAATGCACGTGAACGtgcactgatgatgatgatgcagggTCGTCTTGAAGCCAACCTGGAGGATGAACTGAAGAAAGATCTGGTACCACCTGACTTTGTTACGGGTAAACCACAAGAAGAGTGGACGGAGGAAGAGCAGAAGGCGGCGAAAGACTTCGAAAAGATGGAAAAGCAACATTTAGAAGATCGAGAAAAGTGGAAGAAATCCCTCGAAACAGAGCTGAAAAAACTCCAGTCAAGTATCGCTGAAGCGACGACTGCTTTTGACGAAAAGCTCTCGTTACTCTTCCAAAAGAAAGTCAAAACAGAAATGGTTATCTATCAGGAAGAACTGAAGATATTCCGCCTTCTAGTCTCTATCTTGACGGAAGATGAACTCAGCACCCAAGAAGCAGAGCTCCTTCGTCGCATGGacgagaaaaaagagaagaaatctCGAGTGTCTTCGAGTCAGACTGAAGCCAAGAGAGAAGTGGATGACTTTCGCGAGGCGTATGAGCTCCTTGTGATGGAGGACAAGGCTTTAGACAAGGCATTCAAGAGGGAGTTTGGTGATCAGGACTTGCATACTGTGGAGCAACTGTACAAGCTGTTTAAAAGACGACCAAGAGGCCAGAAACAACTGCGCGCGGTCACGGATCCTCAAGCTGACGTTAAAACCGACTCTCCTTTCGCCCCAAGACCTTCCTCCTCTCGTGTTCATTCCGCTGCAGCAAAGCATTTAGCCAACGCCATGGAAGAGTTAGATAGTATAGAACATATGCCTGAAGGCTTGGAGCTGGAAGTATGGCAAAGGTTTATAGAAACGAGACGACAAAAGGTTGACAGTGAACAACAGGTAAAAGCCAAGGCTTTGGTGCTGGCAGAGATGAACTCGTATCTTCAAAAACGAATGGACGAAGACGAGAGAGTACAACACGACATGGAGCACACGTACCAGGAACTGCAGAGGCTGcgtaaagaaaaaatcaaatttctgaTCAATCTGGAAGTACAGCTTTTACTCAAGCAAGGCCAGGTTGAAGTTCCCCCTGGACCGTTTATTACTGACTATTCCGACAGTATTCTTGTTCACCGATCTGTAGTCGAGGATCTGAATGCGCAGATCACGAATCTTGGCAAAGCAAAAGTATCTATCATGGACGACAGTAAAGAATTTAGGAAAGGAATCCACGGTCTGGAATGGGAACATATGAAGATGCAGATGCAAGCAGAAGATCTGCAGACCAAAGCTAGAGATATCCAGCTATTGAGAGTAACCAAGGACCTCCAACAGTTTTTGACCGAGGGTGATCATCAAGCCCGTCAACAGAAGGAAATCGCTACGCTCGAGCAAACTTTATCATTGTTCCAAAAGATGCACGAGAGAAACGTGAATGACCGCAAAGAAACGATAAAAGGAATCAAACGAGTCATtcacaagaaagaaaaagataatacCAAACTAGACGGTGATCTAGAAGAACTGGCTTTATCTGTTGCCGAGCGACGCAACGTCAACGAGATGAATGCTGAAAGAAGAAATGACACCGGCGCAGAGCGTCGCTACCAAGACATCGTTGCGCGCCGTAAGCTGGTTGACTTGGCCAAAGCGCAAGCCTCAGAGATAGCAGTTCTAAGAGCGGAAGTGGAGCGACTACGCATGCGCACTTTCCCTGCTCTTGTTCAAGTCGAGCgctgataatgattataatcagGCAAGCGACGCGCACAAAAATAAATCTTCCATTAACCGAAACTAAGTAGCTAGTTTAGCTGTACATATAAGTAGTGTCTGACTTAGTTCTCATATTAGAGACTGACATTTTTTgcagtgtttttatttttcttttaatttgggTTTTTAGCTTGTTTCTGTCTTGTACATAAATCATCTCATTAAAACCTAATTTATTATAAAAGAACTAGTCTTATATATCTTGGGCCTCCGACTAGACTCGGGGAGATAACAGCACGAAAGCCCACCTACTGTATGTCCTCGCATCTTCACTATAGTTTTTATATCGATGAATTTTTAAATGTAGTTTCTTCGTTTTCATATCGATATTATCTATTCTTCGCCTGTCGGCAGACACGAGGGAACTACCCGCCTGTCCCGGAAGCATTCGTAATCGCTTAATATTTGCACCTGTAGCGC

Protein

Uniprot

Gene family

Uniprot term	Description
A0A1L8GXY4	Cilia- and flagella-associated protein 43 OS=Xenopus laevis OX=8355 GN=cfap43 PE=2 SV=1
Q8NDM7	Cilia- and flagella-associated protein 43 OS=Homo sapiens OX=9606 GN=CFAP43 PE=1 SV=3
E9Q7R9	Cilia- and flagella-associated protein 43 OS=Mus musculus OX=10090 GN=Cfap43 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14885	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24223	CFAP43, WDR96; cilia- and flagella-associated protein 43	-	Cilium and associated proteins	ko03037	deepkoala