Gene detail

Detailed information of EGACTEQ4350006974-PA in Actinia equina

Genomic Location: WHPX01000126.1:160992...192365
NR annotation: XP_031562275.1, alanine aminotransferase 2-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350006974-PA

ATGGCCGATATGCTTTCTTCTGTAATCACAGTTGATACTATCAATCCAGCTTTTAAAAGGATAGATTACCCTATTAGAGGACCACTAAGTTTACGGTGTAGTGAGATTATCGAAGAGCTCTCTCAGGGTATAAAGAAACCATTTGATAAAGTTATACAACATCTTGGAGATCCACAGGGACTACAAGGACAAAAGCCTATTACATTTGTGAGACAGgctttttctttgttaatgTGCCCAGAGATCCTAATGAGTGATCCAAGGTTTCCCCAAGATGTTAAAAACAGAGTTAAAGAAATACTTAGTCACAAAACTGGCAACACAATGAGTTCATATACCAGTTCACAAGGGTTATTGGTTATAAGGAGGCATATTGCAGAGTACATATTCAAAAGAGATGGCTGTCCCTCTGATCCATCGAACATTTTTATGACAAATGGAGGTTCAGTAGCAATTCAAATCGTCATGAGCGCCCTAAGAACGGGCATGGACGGTGATAAAAGAGAAGGCTTCATGTGTCCTATACCTCAATACAGCTTGTATGCGGCTAAGATATTGGAACAAAATTCATATATGATTCCCTATTACCTAGATGAGGACAATGACTGGCAGCTTAATATAGACGGCCTGAAAAAAGCTTTGGACGATGCTAGACCCTATTGCATTCCAAGGGCACTGGTCTTGATAAATCCAGGAAATCCAACAGGACAAGTGTTTTCATACAAAGCAATCCAAGAGGCAATTAAATTCTGTCACGAGAACCGACTTGTGCTATTTGCAGATGAGGTTTACCAGGAAAACATCTACACAGATGAATTCCCCTTTTATTCGTGTAAAAGAGTTTTGCATGATATGGGCCATGAGTATAAAGACTTGCAGCTTATATCATTGCACTGTAGTGCGAAAGGATACATTGGAGAATGTTGCTGCAGAGGTGCATACTTTGAACTACATGGTTTCGATAAAGAAACGAAAGGTCTATTTCTTAACAAGCTGACAATGAGCTCTTGTCCTAACATTTTAGGTCAGGTTGCGATGAGTCTGATGTGTAAACCACCACAGCCTGGAGAAGAATCTTACGACCTGTTTATCAAGGAGAGAGATACTGTTTTAGAGTCTTTACGCCAAAAAGCTGTGATGACGACCAACATCCTCAACTCGTTGCCGGGAATTAAATGCAATAAAGTTACAGGTTCAATGTACGCCTTTCCTAGACTTGTTCTTCCCCAAAAGGCAATCAACGAAGCAAAGCGCCTTGGTGTAGAACCGGACTATTTTTACGTTTCAAATCTTCTTGAAAACACCGGCATATACGTCGTGCATGGAAGTGGCTTTGGACAGAAGGAAGGAACTTCACATTTCAGGATAACGATCATTCCTTCACTGGAAGAAACGACACTTATGTTTGACAGGTTTAATAAATTCCATCAAGAGTTTATTAGCAAGTACACGACCCGTGGTCAGTATCTACCAACATGGGACTCTCTCGATTCAAGGCCTCTACCACAGTGGTATGACGATGCGAAGTTTGGAGTTATGATGCACTGGGGTGTTTATTCTGTTCCGAGTTTTGGTTCTGAATGGTTTTGGAATCATtggaaacaaagaaattattccTCTTGTATAgaattcatgaagaaaaactATCCACCAGGGTTTACGTATGCTGAGTTTGCTTCCATGTTTAAAGCCGAGTTTTTTGATCCAGAGGTTTTTGCTGACCTGATAAAAAAGTCAGGAGCTAAATATGTAGTGTTTACAAGCAAGCATCATGAAGGATGGACCAACTGGGGCTCAAAATGGTCATGGAACTGGAATTCTATAGATAATGGGCCTCACAGGGATCTTGTTGGGGAAATTGCTTCAACTCTTAGACAGAACACCAACATCACTGTTGGTTTGTACTATTCCCTGTATGAATGGTTTAACCCTCTCTATTTACAAGACAAGAAAAATGGATTCAACTCCACTTATTTCATCAAGGATAAAATACTCCCAGAATTACATGAGATTGTGAACAAGTATAAGCCAGAATACATCTGGTCTGATGGCGATTGGGAAGCTTCAGATGGTTATTGGGAAAGTAAAGCTTTTTTGGCATGGTTATTTAATGAAAGTCCTGTTAAGGAAAGTGTGGTGGTAAATGACCGTTGGGGTGCAGGCTGTATGTGTCACCATGGGTCGGTTTTTACATGTTCTGACAACTACAATCCAGGAGTGCTCATTAAACATAAGTGGGAGAATGCAATGCCAATGGATAAAATGTCATGGGGATACAGACGTAATGCCACACAGCTTGCTGAATATAATACTATACAGGAGCTGATTGGTCAGTTGGTTACAACTGTAAGCTGTGGTGGTAACCTGTTACTAAATGTGGGCCCAACTGCTGATGGCCGTATTATCCCAGCTTTCCAAGAACGATTACTGCAAATTGGAGAATGGCTGAACGTAAATGGAGAAGCAATATATGAAACTAAGCCATGGAAGGCACAAAACGATACACTAACCAAGCATATCTGGTATACCAGTAAAGAATCGGTTACTTATGCTATCGCACTTGAATGGCCGGATTCAGAAAAACTGGAACTTGGACAGCCAATCGCTACAGAAGAAACAGAAATAACTATGTTGGGATACCCAGGATATTTTAAGTGGATGACACCACCGTCTGGAAAAGGCATAATAATTGACATACCAATCATACCTTTCAATAAGCTACCAACCAAGTGGGCCTGGACGTTCAAGATTTTAAACGTTTTCTGA

Transcript

EGACTEQ4350006974-PA

Protein

Uniprot

Uniprot term	Description
C3YWU0	Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV=2
Q2KIM0	Tissue alpha-L-fucosidase OS=Bos taurus OX=9913 GN=FUCA1 PE=2 SV=1
P04066	Tissue alpha-L-fucosidase OS=Homo sapiens OX=9606 GN=FUCA1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01120	Alpha_L_fucos	Alpha-L-fucosidase	Domain	Interproscan
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan
PF16757	Fucosidase_C	Alpha-L-fucosidase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR000933	Family	Glycoside hydrolase, family 29	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR031919	Domain	Alpha-L-fucosidase, C-terminal	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR013780	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR045088	Family	Aminotransferase ALAT1/2-like	Interproscan
IPR016286	Family	Alpha-L-fucosidase, metazoa-type	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11751	ALANINE AMINOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004560	Molecular Function	alpha-L-fucosidase activity	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0004021	Molecular Function	L-alanine:2-oxoglutarate aminotransferase activity	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0006004	Biological Process	fucose metabolic process	Interproscan