Gene detail

Detailed information of EGACTEQ4350007139-PA in Actinia equina

Genomic Location: WHPX01000290.1:803340...809357
NR annotation: XP_031567023.1, arginine and glutamate-rich protein 1-A-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350007139-PA

CACTGAGAACAGCACATTAGCTtcaaaagaagaaggaagaggGGTGAAAAATCTCCTGTTTTTTCTTCAAGATGCCTCGAAGTAGGTCCGTATCAAGGTCTAGATCTCGTTCTAGGAGTCGAAGTACATCTCCACGTCGTAAACGAAAGGATAGGACGTACAGAAAGCGAGGTTCAAAGAGTCATAGTCGTTCTCGCTCAAGGCAAAGAAGTCGGTCGCCATTAAACAGAAAAGACCGATCTTCTCCGAGAAGACGAAGGAATCGTTACTCGAGAAGTCGAAGTCGGAGCCGTTCTCCTAGCGTAGATAGATTTGGACGTACTATACCTAAGAGGAAAGACGATGAAACGAGAAAGAAGGAAGATCAAGAGAGACTATTAGAAATGGAAAGGCAAAGGAAAATacgggcagctgaaagggaacaaagattAATTGAGGAAGAAACTCAGAAAAGGGTGGAAGAGATGGTAGCCAAGAGAGTAGAAGAAGAGTTGGCGAAACGAAAAGATGAAATAGACAGTGAAGTTTTGAGGCGCGtggaagaagccaaaaaagtcatgGAAAAACAAATGCTGGAAGAatttgaaagaagaaaacaagaacaaatgGAAGAACTAAAAAAAAGAGAGGCTGAAGAACGGCAAGAACGAGAAAGACTTCAGAATTTAGTtgctgaaaaacaaaaagctaTTGAGGAAGCAGAGCAGAGGCTGGCCGAGGAGAGACTGGCCATGGTAAGAGAGAAAGGAATACTAAATGAGCAAAAAAGTAGACTTGAAAGAGAGATTCGCAAACAAGAACAAGCGGCACAAGAGATCATtttaaataaaaccaaaaatgcCCGACCAAGACTTTCCTTTGGGGTAAAGTCCAAGGCAGGGATGCTCTAATGAAaggtttttttgaatttctataaagtatgaaataaatattagttttttcCACTAGTTAGGTTCCTAATTTCACTTCATAATTTCTTTTGAGATTTTTTCTTCGTGTTACTAGAAGTCGCGAGAGGGTGCAATGAAATATTTTCTGGCAAAATTCAAACAGTACATGTGAACTTCCTTATTCCCAATTAAAGTTGAATTATCAAATAATCCCCTTTCATTTCAAGGTAACAGTGCCAGAGTGAAAGTGAGAACAGCCATGACCTTGTATTGGTAGAGACTTATGTtcaaaaaggtctctatcattgcatggTCACTGCCATCCTCGCTTCAATGTACAGGCACAGTTACCTTTTAAGATTGAACAGTGAACTATGAAGGGGGCTGTTGTTTACTCCaacatatttcttaaaaaaagaaatgatttatATTCAAGGTATTACAATCTCATTTAGATTATCAACCTATAATCATGAAAACTGCTTATCCAAAGCTTTTCTTCTACTGTTGTTTTATACACCCTGTTCATTCGTAAAACCTTTGATTAGAGTATTATGTTGGTAATCTATTTTATGATAGATAAACTATGATTAGATATTATCCAAAATGCTTCAATTTTTGACAAGGCATTTTGTATGTGCGTTACATTGAATAGTAATTCTAGCACACTATGTAatcaaaaaatcgaattttgAACTCTTCTTATTTCCATTTTCTATCCTAAAATTCTCTCTGTCATAAATAAGATTTTAACTTGTACATATTGGGAGAAAAAATAAAGGTTACTCAGAGGTCATTTTGTTGTCTAGCTGTCACTATTAGACTGGGTTAAAGGTTACTCAGAGGTGTTTTTGTTGTCTAGCTGTCACTATTAGActgattttaatgttttctcatttcagacaatgtgtcattgcttttttttaacatctgtgcatgagaagacatgaatatggatacaactcgaacaaataatctttttctcaagagaatgacacatggtctgaaatatgaAAACAGTATACCCAGTGTAAACAGGTATATAAATCAAGCACATACTTGTTCGCCTGAATCACATCAGGAATTTTcgtatttacaaatatttatttcagatgCAATGCAGGCTAATTCTTGTCTGCCTGTGTCATCCCTTCTTCAGACATTGTGCCATACCCAGCTGGTTAGCTCAGCTGGTAAGAGAATTGGTGTTGTGCAGGGGTCttggttcaagcctcagccggaccaacactcagggtcttaaaatagctgaggagaaagtgctgctgTTGTATTTCCATCTAAGAATAGTTAAACTTTCAAATCTTCTCAgtcaaggacttaaaaccgtaggcccgtCTGCCTTCATTATATAACCCTGTGTAAGGGGGATGTGAAAGAGACACTGGTGATAACCATCTTCAGTGACCATGCTAATTCCACAGGGCCCACAGTAATTGGCTATGCTATTGTGTTGTCTCTGCCCTCACAGAAATTCATGTTACCTATACAGAAAGCACCCCCCTTTTCCTAGATGAAACCAAGATTCCTTGTATTTTACGAAGGTACACTTACCTCTAGCTACATTTTTCACCTCTTTAAAGCTTGTTTAATACCTATACAGAAAGCTATGCATTCTACTGTTCCATGTCATCCCTTGTATTGCATAACTTATCTCTTCCTTAAtcatttttgagaaaacaaatatatctaaGCATAGGATAGTTCCCACACATTGCTACACCCGTTACACCCCTAACTGGACAAAAATGGAAGCACTTTAATTTAatcaatgattttttaaatataaatgtacTAATCACTAATACATCAAATAATCAAGCTGAGTGGAGTATATTTATTGTGAATTGGGGTAATATATATCACTGCTTTAGTTTTAATGATGACACCTTCATTAGACAGGGTACACCATTACTAGCTGATAATTTTCAAGAGGCCCTAAAGACAGTTTTTCTTGCTGTCTTGAGCATAATGCCGTGCAGCTATATTCAAGCATAAAGGGATGCATGTTGTGCAACTCATTGGATTTCCTAC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15346	ARGLU	Arginine and glutamate-rich 1	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033371	Family	Arginine and glutamate-rich protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31711	ARGININE AND GLUTAMATE-RICH PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0045296	Molecular Function	cadherin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13173	ARGLU1; arginine and glutamate-rich protein 1	-	Spliceosome	ko03041	deepkoala