Gene detail

Detailed information of EGACTEQ4350008308-PA in Actinia equina

Genomic Location: WHPX01000579.1:341506...354258
NR annotation: XP_031548870.1, long-chain-fatty-acid--CoA ligase 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350008308-PA

TTTTTAGGCCAATcgtcagttaactgttaacaGCCTCTTAGATCAGCAGAGAAGTTGTTTCGGAGTTCAATAAAATGCTAAGTTCCTAAAGGTGATCTAATTCTATAAAACAAATGCACAAATGCTTCCCAAAATTCAGGATTCTGGAGGTGCAAGACGCAGCGCGCTCACAGACCAAATAATAGCTCGTTCCTATGACGACGTCGATACAGTCTACAATGGGTTCTTACGAGGTGTACGGCTATCAGGTGGCGATCCATGCTTAGGTAAACGACATCCACTTTTGCACAAATATGAATGGCTTACTTACAACGAGGTTCACAGCCGGGCGTACCATGTGGGATGCGGTCTTGTTAAAATTGGCTGTCAACCCTCACAAAATACTTACATAGGAATATATGCACCAAACTGTGTTGAGTGGATTTTGACGGATTTAGGTTGTCAGATGTTCTCTATGATCAGTGTTCCTCTGTTTGCAACACATGGCCCCGAAGCGTGTCGTCACATCATCAAAGAAGCCAACCTTCAGACGGTCATTTGCCACGAGTCCAAAGTGGAATTCGTTCTTCGTTCTAGGGATGAAAACAGCGTTGTCCAAAGGATCGTAAAAATAGGAAGTGAAGTCACGCAACATGAAAAATCCTTAGCGGAGAAATGGAACATCAAGCTGATTGCTTTTAAACAACTCCAGGACATAGGGAAAACTACTCCCCTGGAACGTAATGTACCCAAAGCAGACGATGTTTTCACAGTATGTTACACGAGTGGAACAACGGGAACCCCAAAAGGAGCAATTTTAACTGATGATAACGTCATATCGGACTTAGCTGGCTTCAAATTTCTGTTGACACAATTCGACAAGGAGGTGACCAAAGATGATGTCTTGTTATCCTTCATGCCCCTTGCACACATGTATGAACGAATGAACCAGGTGATTTTGATGTCGAGCGGAGGTCGCATAGGGTTCTTCAGCGGTGATCCAAAGCGCCTTCTCGATGATCTTAAAGAACTCAAACCGACTGTTTTTCCTGCTGTTCCTCGTCTACTCAACCGTATTCATGATAAGGTGATCAACGAAATCAATAAGAGCAAAGTAAAGAGCTGGTTGTTTGAGAAAGCTATGATGGCGAAGAAGAAAGATCTTGAAAGGATGGTGGTCAGGAAGGATACTTTATGGGATCTTCTGGTCTTTAAGAAAATCCAGGATCTCCTGGGGGGTAGGGTGTGGCTGATCATTTCCGGTTCTGCTCCACTATCTTCCAAGGTCACTACATTCTTGCGATGCGTCATGGGATGTCACGTACAAGAAGGCTATGGTCAGACGGAGGCAACTGCATCATCGGTGCTACAGTTATTGGATGACTTTTCAAGCGGTCATGTTGGTGCTCCAAACCCCGTGAACCATGTGAAGTTGATTGACGTACCAGAAATGGATTACTATGCTAAGGACAATCAGGGGGAGATTTGTTTGAAGGGAAGAAACGTATTCAAGGGATACTTGAATAATCCTGAGAAAACTGCTGAAGTACTTGGTGAAGATGGCTGGCTCAAGACTGGTGACATTGGGGAATGGACTGAGAGTGGTACTTTAAAAATCATCgaccgaaagaaaaacattctCAAGCTGTCCCAgGGTGAATATATTGCACCAGTTAAAATAGAAAACATCTACATGAGGAGCCCATTCCTGGCACAAGTCTTCGTCCATGGGGATTCATTACGGTGGCTATAGGTGTACCTGATGAAGAGGTGCTAGAAGCCTGGGCTAGAAAGCAAGGCATCATGGGAAGGTTTAGGGAACTGTGTAAAAATAAGAGGGTCCTAGATGCGGTTTTAAAAAGCGTTACAGATATTGGAAAGGAATGTAACCTGAATTCACTTGAGCAGaTAAAGGGAATATATCTACACAATGAGCCTTTCTCCATAGAGAACAACTTGCTAACTCCAACCCTTAAAAAGAAACGACCACCTCTAGTGAAACTCTTCCGGAAACAAATCGATGCATTGTACGAATCAATCGATAACGTTTCGTAACTGTCAAAAATCCTGACATTTCTATGAAATTTTGGCCAACTTTTCGCCAcacaacgataataataataataataataataataataataataataataataataataataataataataatctttaaacaGTTGGCCTACATCATTTAAAAATGCTTTTCGGTAGGGCTCTGtataaattagaataaaaacaacaatgaaaTTAACTAAATAAGTAAAAGCGAAATCAGGcaaactataaaaataaaatataaaaatcctgtaaaaactaataaa

Protein

Uniprot

Uniprot term	Description
P41216	Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus OX=10090 GN=Acsl1 PE=1 SV=2
Q9UKU0	Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens OX=9606 GN=ACSL6 PE=1 SV=4
P33121	Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens OX=9606 GN=ACSL1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020845	Conserved_site	AMP-binding, conserved site	Interproscan
IPR042099	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR000873	Domain	AMP-dependent synthetase/ligase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43272	LONG-CHAIN-FATTY-ACID--COA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001676	Biological Process	long-chain fatty acid metabolic process	Interproscan
GO:0004467	Molecular Function	long-chain fatty acid-CoA ligase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01897	ACSL, fadD; long-chain acyl-CoA synthetase	EC:6.2.1.3	Exosome	ko04147	deepkoala