Detailed information of EGACTEQ4350009290-PA in Actinia equina

Genomic Location: WHPX01000918.1:131363...177052
NR annotation: XP_031563112.1, uncharacterized protein LOC116298715 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PD62RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 PE=1 SV=1
Q62018RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2
Q4QR29RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13374TPR_10Tetratricopeptide repeatRepeatInterproscan
PF00617RasGEFRasGEF domainFamilyInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF00640PIDPhosphotyrosine interaction domain (PTB/PID)DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR006020DomainPTB/PI domainInterproscan
IPR023578Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR000225RepeatArmadilloInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR001895DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR031101FamilyRNA polymerase-associated protein Ctr9Interproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR019748DomainFERM central domainInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036964Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14027RNA POLYMERASE-ASSOCIATED PROTEIN CTR9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016593Cellular ComponentCdc73/Paf1 complexInterproscan

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