Gene detail

Detailed information of EGACTEQ4350009290-PC in Actinia equina

Genomic Location: WHPX01000918.1:131363...179834
NR annotation: XP_031563112.1, uncharacterized protein LOC116298715 [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6PD62	RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 PE=1 SV=1
Q62018	RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2
Q4QR29	RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00373	FERM_M	FERM central domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF14559	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00617	RasGEF	RasGEF domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019748	Domain	FERM central domain	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR006020	Domain	PTB/PI domain	Interproscan
IPR000225	Repeat	Armadillo	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR003107	Repeat	HAT (Half-A-TPR) repeat	Interproscan
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR031101	Family	RNA polymerase-associated protein Ctr9	Interproscan
IPR035963	Homologous_superfamily	FERM superfamily, second domain	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14027	RNA POLYMERASE-ASSOCIATED PROTEIN CTR9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0000993	Molecular Function	RNA polymerase II complex binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593	Cellular Component	Cdc73/Paf1 complex	Interproscan