Gene detail

Detailed information of EGACTEQ4350009290-PD in Actinia equina

Genomic Location: WHPX01000918.1:131363...168382
NR annotation: XP_031563112.1, uncharacterized protein LOC116298715 [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4QR29	RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis OX=8355 GN=ctr9 PE=2 SV=1
Q6PD62	RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 PE=1 SV=1
Q62018	RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00640	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00373	FERM_M	FERM central domain	Domain	Interproscan
PF00617	RasGEF	RasGEF domain	Family	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR006020	Domain	PTB/PI domain	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR000225	Repeat	Armadillo	Interproscan
IPR031101	Family	RNA polymerase-associated protein Ctr9	Interproscan
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR019748	Domain	FERM central domain	Interproscan
IPR035963	Homologous_superfamily	FERM superfamily, second domain	Interproscan
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan
IPR014352	Homologous_superfamily	FERM/acyl-CoA-binding protein superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14027	RNA POLYMERASE-ASSOCIATED PROTEIN CTR9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000993	Molecular Function	RNA polymerase II complex binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0016593	Cellular Component	Cdc73/Paf1 complex	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26456	TANC; protein TANC	-	Cytoskeleton proteins	ko04812	deepkoala