Gene detail

Detailed information of EGACTEQ4350010202-PA in Actinia equina

Genomic Location: WHPX01000670.1:412397...421824
NR annotation: XP_031562965.1, transcriptional enhancer factor TEF-1-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350010202-PA

CCATCAGTCAAATACTCCTCGATATGTTCCCCTGCTTCACAAATATCCAACCAAATAATCCCCAAATTAATTCAAAAAGAGACCCTCGAGAGATGTGTAATAGAAGATACCAGATTATAACGACCGAGATGTCGAATATCCCGCCAGTTGGGATTCTCCGTATTTGGTCATATTGTTAGCGAGTTTTGAATTCCTCTAAGGTTAAGAGAGCAGTCGAGCAAATGTGGCGGACCCCCCTCTAGCGGGTAATGTTGGAGCTCTTTTGTGGGCGCGCCGAACATAGTTTCCCTCATTCCTTACATTCTTTGTTCGCTTCTGGTTTGCAGAAGCTCAAATCAATCCTCTGTTGTGACTCATTTAGCGAATTAGGTTACCCAAAGCGATAAGGTTTACGAGCTCTGCCACTACAAAGAGAATTCTCAAGAGCTCGTCAGTTGTGATCAAAGTCTTTGAGAAACATTGAACAAGTCAAGAAGTTCCCCGCCAAAAAACACTTTGTAGGACGCAGACTTGAATCGTTCAAATTTTTAGCATTTTTCGAGAGTTGTTCTTCCGGATTCGAAGATTGTCGATCCAGAATTCAGCTCCTATCTGAGTTCAGCGCAAGATCTCCAGCCCACATCGGGGTAAACAAGTTTAATTTTAAGTGAATTTTCATTAAAACCGCCAAGATTTCGGACCAAGAGTCAAACGACGATATGACTAATTCAGCCGATGAAGGCAAAGCCAAAAGTCCAGCCGACATGGCGAATGATGCAGAAGGAGTTTGGTCTCCTGATATTGAGCAATCATTCCAAGAAGCATTGGCCATTTATCCGCCATGTGGTCGgagaaaaattattttgtctgATGAGGGCAAGATGTATGgCCGGAATGAACTGATTGCAAGATATATAAAGCTCAGGACAGGCAAGACTAGGACTAGAAAACAGGTATCAAGCCACTTGCAAGTGTTAGCAAGGAAAAAGGTTTCAAGTCACATACAAGTCTTAGCAAGAAAAACTGCAAAGGATATCCAAGGAAAATTTAAGGACCAAGCAGCTCGTGACAAGGCTTTACAGACAATGGCTTCTATGTCATCTGCACAAATTGTCTCTGCTTCCGTTATACACAACAAAAATACATCTGGCGGTGCTTCTGGTTTTAGTGGAAATGATACTCAGTCTTACCAGTACTGGCAGCAACCAGGCTCCAACCAACAAGCAGCAGGCTATGGATCTGTCAATCAATCACCTTACGGCAGTCCCATTCAGCCTGGTATGCAAGCAGGCAATGTAGTTTCCACAGCAACAGCTGCTAGTTCTGCTGGTGCTGTCGTCAACTCACAGGATGAAATAGTGAGAAGTACAACTTATGGAGACACAAGGACAGTAGTAACGAGTCCTCCAACAGGTCATGCATCCTGGAACAGCAACAGACAGGCTTCTCATATGcCACTACGCTTGCTAGAATTTTCTGCATTTCTAGAGCAACAAACAATGGACCCAGAAACTTATCATAAACACCTTTTTGTTCACTTGGGACCAAACACTAACTTTACAGATCCACTTCTTGAGGCTGTAGACATCAGACAGATTTATGACAAGTTTCCAGAAAAGAAAGGTGGCCTTAAAGAATTATATGACAAGGGACCACAACCTGTGTTCTTTTTGGTTAAGTTTTGGGCTGATTTAAACACCAGCATTCATGATGAAGCTGGAGCATTCTACGGGGTTTCTAGCACATATGAATCTTCTGAGAATATGACGATCACCTGTTCAACTAAAGTATGTTCGTTTGGAAAACAAGTTGTGGAAAAAGTAGAGACAGAATATGGTCATTTTGAAAATGGAAGTTTTCTGTATCGTATTCACCGATCACCAATGTGCGAGTACATGATTAACTTTATTCACAAGCTCAAGCAGTTACCTGAAAAATATATGATGAATAGTGTGTTGGAAAACTTTACAATTCTACAGGTTGTAACCAATCGGGAGACACAAGAAACCTTATTATGCCTTGCATATGTATTTGAAGTATCGACAAGCGAGCATGGCGCACAGCATCATATTTACAGGCTGGTCAAGGACTAAACACCAGCTGCACAAACGTGGACTGCATTAGACACAAGCTTATCCTGCCTGCAGTAAGGATGCAGTGTGGACCTTTCAGTGTGGAAAAGTCTAAGCATATAGAAAAGTACACgagtataaaaatatatctattatatatatatatatataaataattctaTTAACACATTTATTGCTTCAAAAAGGTGTAGGCAAAACCTTTTTTGGAGGAATTTATTTTTTGGTACACCTAGTAGTTAGCAGGAATGCAGGTGCTTGTGTTGCAAAAAAGCTTAAATGTGTTCATACAGAC

Protein

Uniprot

Gene family

Uniprot term	Description
P30051	Transcriptional enhancer factor TEF-1 OS=Mus musculus OX=10090 GN=Tead1 PE=1 SV=2
P28347	Transcriptional enhancer factor TEF-1 OS=Homo sapiens OX=9606 GN=TEAD1 PE=1 SV=2
Q15561	Transcriptional enhancer factor TEF-3 OS=Homo sapiens OX=9606 GN=TEAD4 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	TEA

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17725	YBD	YAP binding domain	Domain	Interproscan
PF01285	TEA	TEA/ATTS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000818	Domain	TEA/ATTS domain	Interproscan
IPR041086	Domain	YAP binding domain	Interproscan
IPR050937	Family	TEC1/TEAD Transcription Factor	Interproscan
IPR016361	Family	Transcriptional enhancer factor, metazoa	Interproscan
IPR038096	Homologous_superfamily	TEA/ATTS domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11834	TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0035329	Biological Process	hippo signaling	Interproscan
GO:0048568	Biological Process	embryonic organ development	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09448	TEAD; transcriptional enhancer factor	-	Transcription factors	ko03000	deepkoala