Gene detail

Detailed information of EGACTEQ4350011197-PA in Actinia equina

Genomic Location: WHPX01000290.1:530108...532692
NR annotation: XP_032236930.2, hippocalcin-like protein 1 isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350011197-PA

CAGCCACTTCGACTCGTCGTCGAAAATACAAGCTATTTTCATGTGTGTTTTCGACTTGTGATtcgtgttttcttttgtttagttggTTTGAAATCTTCTATACTAATGCTCGTGAATTGATCGTAGCAAGAGCCAAAACCATGGGAAACAAAAAATCCAAACTTCAACCTGAAGACCTACAAGATCTAATGCAAGGGACGCACTTTTCGCgaaaagaaattcaagattGGTTCAGAGGTTACATGAAGAGTTGTCCCAGCGGGTTCGTTAGTTTAAAGGAATTCCAAAATATGTACTCGGAATTTTTTGAAGGGGATGCGAGCGACTTTGCAATGCATGTGTTTCGAAGCTTCGACTGTGACAAAAGCGGGTTGATCGACTTTAAAGAATTCATGCACTCTCTTTCCATGTCGTCTAGGGGAAGCCTGGATGAAAAACTTGAATGGGCATTCAAGATTTACGACATCGACGGCAATGGCCAAATCTCGCGTGCCGAGATGAATGAAATTATGGAATCTGTTTTCAAGATGTACCCACGAAAGCACTGGCCCGGGAAAGCGACGCCCAAAGAACGCACGGAAATTATTTTCAACAAGTTCGACAGGGATAATGATGGTTACTTGTCTGTTGATGAATTTAAGGCCGGTGCGTTGGAAGATCCTGTGTTGGTAGTGATTATGCAgtacaaaccaaacaaacaaaatgaagaCTATTAACTGTGAGACACACGATCTCCATGTTGAtacttttggggctgattacaGTAGCAAGGGAGGGTTCTCTTAAACGAAATTATGTACGAAGGTGTTAAAGTTGTGACCTTCTTCCGAGTTCGATTGcgcattaatatatattaattatatattagtaatatatatatattaattttatatttagagCCGGATTTTCCTTCACCTGCATCAAGCAGAATTTTCGACAAACAATCCTAATGTAAAGAAAATGGTCCCTTGTCAAAAATATCATGGATCGAgaataacatgaaaaaaatcacactttttctcaatCGAAATtgtgtcatttcttttgtaattcCACGTTAGAGATAATTGTAAGGAGGGTCCATTGACAGAAAAATCtttagaaaagaaaatgtttgcgtTTTGTTCGTATCCCGGTGGTCGTTTTTCAACGCCACACTTAAAACTATAAAACCTTTTGTGCCTTAGCTTAAAAATTTACCACCTACCGTTATAATCTTTCATCTTTCTTATCACTTTTTCGTGACTAAAGTCTATGAGGTCCTCTAGACGGAGAGACACAAACTCAGTgcatccccacccctccctccttaGTGGTATAAACAGTCCGTCATTTGAACCTTCCGCATTGATTGTTCAGAATCTTTAATATCATTGTTTGCTCAGTTCTGTTCTTTCGCTTTCGTCAATCAAAATTTTACTAAATCAGGCATTTTGAAATCCTGAAACAGCTGCGTCTGGAGTTTTATGGGTTGCAGAAATGAGATTTACGAACTTTGCTAAGCTTTCAGTGGCCTTAATAACACCTtatcaatattttatagattatGAGATAAATTATACAATAAACAAGCATTTTGAATGGTTATCGCAGCGTGACGTCAGTACTAGACTCCAGGACTCTTCggtttcacatgacgtcattaCGAGTTCCTTTTCATTTGTATCATTCGATACTTTCAAAAGGTATTCAACCTCAATATATATCCTAGTATCTGCTTATTAATTATCAATACGATTCATCAGCATTTTTAGCTGTCCTTTATTATCAACTGCGAATGCGCACACGAAAGCCTGAAGCCTTCTCGACCCCAGACCTTTTTCGTTCGTACTGCGCATGCTTTGTAGCTTGGTAGTCTTGACGTCAGTGGGAGAACTGACCAATAAGAGGATGTTATGTAACTACCAATGAAAGTGTTGCTTAGATGCGCAGTGACAATGCGTAGAAGGAATCTATTCAGTGTCCATTACTGTTGGattttttttcggtttcttAGTCTATGTCATTTAATATCAACAGAAAAGCCTCATAAGGACAAAACAAAGCTTAGATCTAGGAGATAAGGagatttgaaaaaagaaaggaatattTA

Protein

Uniprot

Uniprot term	Description
Q4PL64	Neuron-specific calcium-binding protein hippocalcin OS=Bos taurus OX=9913 GN=HPCA PE=2 SV=3
P84074	Neuron-specific calcium-binding protein hippocalcin OS=Homo sapiens OX=9606 GN=HPCA PE=1 SV=2
P84075	Neuron-specific calcium-binding protein hippocalcin OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR028846	Family	Recoverin family	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23055	CALCIUM BINDING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23847	HPCAL1; hippocalcin-like protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala