Gene detail

Detailed information of EGACTEQ4350012434-PA in Actinia equina

Genomic Location: WHPX01000143.1:218368...225142
NR annotation: XP_015773159.1, PREDICTED: uncharacterized protein LOC107351386 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350012434-PA

ATGAAGGAAGTAGTGTTTTTCCCAGAGTACAAGATCTCTGAGAACACTCAAAGAAAACGAAAGCATAGTTCTTCTGAGCTAAGAAATGCCATAGCCAAGGGTGTTACTCTTTTGCAAGATCACAGAATTTATATCAAATTCCCAAGAAAAAACAGTCACAAAAACCATATCCTTGGGGAGGCAAGTGGCATACAACAACTAAGAGACCCAAGTGAACTGCAGCCCTCATGCAGCATGGTCCAGCCAGATAAGGTAAAGATTAATGTAGCTGAAGCTTCTGATGAGGCATCTGAAGCTTCAAATGTCAATGATGATGAGGCAAACAATCCCCTTCCACTTTGTAAAAAATACCACAGAAGTGAAGCTGCACAGCTGTGCCGCAGTCTGCTTGCACAATTAAGGTGTGCTACCTTCCTGGTACAATCCACAGAGGTATTAGAAGCCCTAGGACAAACACTTTCTAAAGTCCTAACAGAGATAAGAGCTCACATCTACCAGGAAGATGGTATAGAGGTTGAAACTTTACAGTCTAAGCCtcagaaaaggaaaaatgaagaaTGCCATGGTCAGAAGAGAGAAGAATTAGGTAATCTCCCACTACTCCCCAAAAAGAATTCCAGAAGACATGGTATGAAAGCCACAGAAGGACAAGAAAAAGGACACAAAGAAGAACAGGAGAAAGGACATGAAGGAGGAAAAGAGAAAGGACACGAAGAAGGACAAGAGATAGGACATGAAGAAGGACAAGAGAAAGGACAAGAAGGAAAACTAGAACAAGgacaagagaaagaaaaagctgCAGAACTTAATGATGATGGTAtggatagtggtgatgatgacatatATATTATTGGTGTCAGAAAAGGAACCAGGCAAACAGAAAAgaggaaacaaagaaagatgGACAAGTTGGAGGAAAAGAATATTGCAAGTGGTAGAATGCTCAGTGACATTTCAATTAACATTACACAAAACTTGCTCCATGATCAGTTTCCCACTTGTCAGGGTTTGGAAGACACCACACTGAGTAATTTTCTTCAGTACTCAATATGTAATGGTGAATTTGTCCAAATTCTCTTTACTGGACAGCAACACTGGGTTACACAAAAGCTTAATTCAAAGTACAACATCAATCAAAGAATCACTTCTGCATATGATCCACAATCGAATGGTTTGTGTGAGCAAGCAAACCAGACAGTAAAGAAAACTCTCAGAAAACTCCTAGAGGACAAAAATGAAGACTGGGATGATTACTTAGATGGGGTATTGCTTGCCATCAATACTAACACCAGCACAACCACCAAGTACAGTCCATTTTATCTTGTGTATGGGCGTAATCCTTTATTACCAATACAAAGTGAAATAGAAAGCAAGCACCCAATCCCATCTTTTACTGATGAGGATCTGCAACAGCAGCTTTCAAGTCATATTGAATCATTGAAGCAAATCCAAGATGAAACATTTCCCAAAGTCTTAACCAATATCATTGATGCCCAAGAGAAGCAAAAACAATaccagaaaagaaaagatgtgCTGGGGTTATCATATCAAGAGGCAGAAAAGTACATTGACAACCCCCAATCTAAGAATACATCCCTTAAAAGACAATCTAAAGCCACAGATCACACCGAAGttaaaccaaaaaaacaaaaggttCAGAATAATCCTACCATTAGCACTTCTGTAACACATGACGACTGTGAAATTACCTTTGAAGGTAAAGGTACACTAACTCCAAACCAAATGAAAAGATTCGAAAGGCCTCAATATgtcattgaaaaaaatgacaaagagaCAATACTTCAAAGTGAAATGCTGACTGACAGGCACATCATGATGGCACAGTCTCTTTTAAACAAGTCCATAAGGAAAATCAAAATAGAAGTAAAGCCTGTCCATCCACAGAATGGTGTGGACTGTGGTGTCCATGCCATAGCCATTGCCCTTGCCCTGTGCCAAGGGGTTGATCCAAGTGCACTCAAATTTAATAGAAAAGAAATTCGCAATCACCTTTGGAACTGCTTAGAGAGCAAGCAAATGAGCAAAATGTTCCCCCACCAAGTAAGACCATGTAATGGCAATGAGACCACCATATTGCTTCCAATCTACTGCAGCTGTAGAAGGCCACTCTTTCCTGGTGATGAAAAGATGGCAGCTTGTGAAAAGTGCAAGGAATGGTTCCACCAAAGCTGTGAAAAAATTCCCAACACAGTGTTCAAGAATAAAGCCCTGAAGTGGAAGTGTTCCGGTTGTTAA

Transcript

EGACTEQ4350012434-PA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15299	ALS2CR8	Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8	Family	Interproscan
PF00628	PHD	PHD-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR029309	Family	Calcium-responsive transcription factor	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34718	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan