Gene detail

Detailed information of EGACTEQ4350013138-PA in Actinia equina

Genomic Location: WHPX01000510.1:157198...161523
NR annotation: XP_044184198.1, uncharacterized protein LOC122964576 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350013138-PA

ATGGATACAAAACTACAAGAAGAGATAGAGAGACAACAGAACACATTGATGACTAAGCTTGTCGAAGTGATGGACACTAAGATGAACCATTTGAAGAGAGAGTTAGAGACTATTTCGGGCACCGCACACGAAGCCCAGATGAATGAAATCAAACGAATAAAGTTCACTGAGCCTCGTTCATTCAAGAAGAAAGGTCACGAGCACCAATTCAAGCATAACGAACAAGTAAAGCAGACTGTCGTCGAGGCCCGAGAGGCTGTTCAAGCAAGAAAACACGAGGCTTGCCTTACAAAGCTGGAAGAAGGTATTGCTTTAATCGACCAACGACAGAAGCTAATCCTTTTAGCTGACAAGTCAGAATACGTGTGGAAGACCGTAGGCGAATACGTAGAGAATGAACTCGCAGAGGATGACGATGATgcaaaaaagatcaaaaaagctgaaaaagaagCTCAAAGAAAAGTAGTCGAAGCCCGCGCAACCAAAGCAGGCAGGAACCGCAATGCTTGGTTCAGAAGAGCTCCTAGAACCGCCCCTACAGCTACAGTTACCAACCCAACAGCCAACAGTTTTGTTTCTCAGGCAGCTTTACCCATCGTGGGTCCAGGTCGAGGATATTCATACTACCCTGGAGCTTATAATGCAAAGAGAAGCGGGTTGTGTTTCAGTTGTGGTAAACCGGGGCATTGGCGAGGTGAATGCCCACTGATAGTAACCGAAGGGTCTACTCCTCAAGCAGGAAACAAAAAGTTAAGTATGCCTGATTTTTCCTTGTTAGATGATTCGGAGGGAATAAAAGATGGGCAAGAGTGTTTTCGCACAGGTTGGGAGAGCGAATTTAGTGACGATATTGTTATAGAGAACGATGAGCAAGCAATGGCAGATTTCCTAGAGTTTGATCAAACTCATGAGCAGGTGAGAGGAAATCTCAAACGACATGTCGCTGAATGGGAGGCGTTAGAAGTCACTCAACCGGTGTTAGAGATTGTTAAATCGGGTTACAAACTACCTTTAATAACTCTCCCTGAGCCTACAGTGCTAAGGAATAATAAGTCGGCTTTAGACAATCAGGTTTTTGTCACAGAAGCTATAACAGATTTACTAACTTGTGGTAGCATCGATAGGGTGGACTACCAACCAAAAGTTGTAAATGCCTTGTCCGTTTCCATTCGCGATGATGGAAAGAAGCGATTAGTTCTAGATTTAAGGCATGTTAACCCACACCTCTATAAATATAAGTTTCGGTGCGAAGACGTAGAAACAGctaaacagctttttcaaagGGGGTTCTTTCTCTATACTTTCGATATCAAGAGCGCTTACCATCACGTTGAAATTTTTGAACCTCATCGATCCTATTTAGGTTTTCGATGGTTCTATAAGGGTAAGTtacagtattttattttcaatgtaTTACCATTCGGTTTATCGACGGCTCCGTATTTGTTTACTAAAATGCTCAAACCAGTCGTGAGTTCATGGAGGGGTTCGGGTAAGGCCGTCTGTATGTTTTTAGACGATGGAATAGGAGGCCATCGCTCTTTGGAGTCTGCAACATCTGATGCTGCATCCGTTCGCGAGCATCTATCTCGACTAGGTTTTATCCTCAGTGACACTAAGTGCGACTGGGAACCTAAGTTAGTGCAAACCTGGTTGGGACACGTTTTTAACATGTCAGAAAATCGCCTGTATGTCACAGAAAAAAGGGCAAATAAGCTCAAAGATTCAGTAGCGCGCATCCTCACAGGTCCCAACACAATACAAGCCAAGCAGCTAGCGGGGGTTGTGGGTCAGATTATTTCCATGTCAAAAGCCATTGGGCCAAAGGTTTACCTGCACACTCGACATATGTATTATGTTTTAGAGACCAGGTGGTCCTGGAATTCCGTCGTCCACCTAACTTCGCGCGTTTTGGAGGAATTGTCCTTTTGGACCAATAACGTAAGCCAACTTAATGGTACAGAATTGTTTGAAGAACCTCGGAAATTCGATTCCGTGATTTATTCCGACGCTTCTGGGCGTGGTTATGGGGGGTTCGCTATATCAGCAGGAAATAAATTAGTTTGCCACGGGCTTTGGGATGGAGCTGAGAGAAACAAAAGCTCAACTTGGCGTGAAGCCAAAGCAATTGACAACATGATACAGTCCCTTGCAAACACGTTACAGGGGCACAATATACAATGGTACACCGACAATAAAAATGTCGTAAGCCTTATCCATAGGGGAAGCATGAACCCAGAGTTACAGGCAGTTGCTGAGCAAATCGCAGATGCTTGTTCGGTCAATAGTATATCAGTAAATCCAGTTTGGGTTCCAAGGCAACAGAATCAATTGGCTGATTATGTAAGTAAGCTTAATGACGTGGACGACTGGGGCATAAGCATGCCTATATATAAGTGGCTCAATAACATGTGGGGCCCGTTCACCATTGATCGATTTGCATCTTGGTATAATACCAAATGTACCAGATTTAATTCCAGGTTTTGGAATCCTGGTTGCGAGAACGTAGACGCATTCGCGCAAAATTGGGGCTCAGAGAACAACTGGGTTGTATCACCTCCAAGCCAGATCATTAGAGCCTGGAGACATTTTTACATCTGCAAAGCTAAGGGAGCTATGATTGTCCCCCTTTGGAAGGGAGCGGTTTTTTGGCCATGCCTATGCCCAGATGGCACTCATTTGTCAAAGCATATCACAGACTGGGTGGGAATCCCGGACTATCATGTCCCAGCAACTGTTCCCGGGCGTTGTTTCAACACATTGTTTAAGGGTACGAAACTGAGCTCCAGGCTCATAGCTGTATTTATAGATTACAGTCGCCCGATAACGAGAACGAATGACAGAGGCTTTTGCATGTCTTTTAATGGTATATGCGACAACTGCGTTCTGACTGGTATGAACATCTTTAATTTTGGGGAGTGGAAGGAACTACAAGATCGAGTAAGAGACGACCCAAGTTTGGTCCGATTGCATGACATTCTTAAGAAGTCTGCTATTTGCGCTAAAGCAGACGGGACTGTTCGTAATTACGTTTATTCGTTAAATCGCTGGGTAGTATTTGCAAAAAGGAAAAGTTTTACAGTTTTCCCAGCTTCGGCCGTAGATGTTGCCCTGTTTTTCGGATTTTTGTCAGATAATTTCGCCTCCGCATCAGTTATTGAAACCAGTTACTGTGCTTTGAAGTGGGTACACGATTTGGCTGGGGTACCTAACCCTGTAGTTAATCCCTTTGTTAAGAATGTGATCGAGGGGTCTAAAAGGCAGCACGCCAAACCTACAGTTAAGAAAACGCCGATTTTTTGTGACGCACTTCGTTTGTGCTGTTCTAAGTATCAGCTAGATAACACCTTAACTGTTCGTAGAGATATCGCTATGGCTCTACTGCTATACGCCGGTTTCTTTAGGTTTAGTGAACTAGCCTCCCTCAGAGTTAGAGATGTCACAATTTGTGATTCACACGTGACCATCCAGGTCACACAGAGTAAAACAGATCAGTATAGAAAGGGTCAGGAAGTAGTCATTAGTAGGACAGGCAATCCCACTTGTCCAGTTTACaatttggaaaaatatattcaattggCAGGCATCACGGGGCTCGGTTCAAACCCAGATTATGTGTTTAAACCTATAGTTAAGACTAGCAGGGGTTTTATGCTTGTTCATAAAAGCAAGCCGTTAAGTTACACTAGAGCTAAGGAATCCATTATCGGTTTGGTTAAACAGTTTGCTGGAAGTGATGCAAATCATTCGTTACATTCGTTCAGGGCAGGTGGAGCTACGTCAGCTGCTAACGCCCGAGTCTCAGACCGTTGTTGGAAGCGACACGGTCGATGGAAGTCAGAGTCTGCTAAGGATGGGTATGTGGAGGATTCTATTGAGAATCGGTTACTTGTTTCAAAGTCTTTAGGCTTATAA

Transcript

EGACTEQ4350013138-PA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF13456	RVT_3	Reverse transcriptase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052055	Family	Hepadnavirus polymerase/reverse transcriptase	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR002104	Domain	Integrase, catalytic domain	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR010998	Homologous_superfamily	Integrase/recombinase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33050	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan