Gene detail

Detailed information of EGACTEQ4350013854-PA in Actinia equina

Genomic Location: WHPX01000746.1:228706...244851
NR annotation: XP_031549437.1, RNA cytidine acetyltransferase-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350013854-PA

ATGGTACTAAAGAAAGTTGATAACCGGATCAGGGTTCTCATCGAGAATGGCGTCCAAACAAGGCACAGATCCTTGTTCGTGGTCGTTGGAGATAAAGGAAAAGACCAGGTAGTGATCTTGCACCACATGCTTTCCAAAGCTGCTGTCAGGGCCAGACCATCAGTGCTGTGGTGCTACAAGAAAGAACTAGGATTCAGTAGcCATCGtaagaaaagaatgaaacagttgcagaaaaaaatcaaaagtggTACCCTTAATGTGAAAGAGGATGACCCTTTTGAGCTGTTCATCTCGGCAACCAATATTCGTTACTGTTACTACAATGAAACACACAAGATCCTCGGCAATACCTACGGGATGTGTGTACTACAAGATTTTGAAGCACTTACACCCAACCTTTTGGCTCGTACCATTGAAACAGTAGAAGGAGGAGGAATAGTGGTTATTTTGCTAAGAACCGTGTCATCTTTAAGGCAATTGTACACCATGTCAATGGATGTTCACAGTCGATACAGAACTGAAGCTCATCAAGATGTAGTAGGCAGATTCAATGAAAGATTTATACTTTCGCTGACCTCCTGTAAAGAGTGTCTTGTGATTGATGATCAGTTGAATATCCTGCCTTTATCATCACATATGCTCAGTATTACTGCAATACCACCAAAAACAAAAGAAGAATCCATGTCTTCAAACGATATTGAACTGAAACACTTGAAGGAGTCTCTTCAGGACACACAGCCTGTTGGGACCCTTGTCAACTGCTGCAAGACACTTGACCAAGCAAAAgctttattaaaatttattgaaGCCATCTCAGAGAAAACACTGAGAACAACAGTCTCTCTTACTGCTGCTCGTGGCAGAGGAAAATCAGCTGCTCTGGGACTAGCACTGGCTTCTGCCATTGCATTTGGGTATTCTAACTTATTCGTAACCTCACCAAGCCCTGAGAACTTACACACGTTATTTGAGTTTGTGTTTAAAGGATTTGATGCCTTGGATTACCAGGAACACATAGATTATGAGCTCGTTCAGTCCACCAACCCTGAATTCAATAAAGCTGTTGTTCGTGTGAATATCTTCAGAGAACACCGACAGACAATACAGTATATCCATCCCTCAGATGCACAGAAGCTTGGCCAAGCTGAGCTTGTTTGTATTGATGAAGCAGCAGCAATACCTTTGCCTCTAGTAAAGAGCCTACTTGGCCCATATCTGGTGTTCATGTCATCTACAATTAATGGATACGAAGGAACAGGTAGATCATTATCTCTTAAACTGATAAACCAACTGCGCCAACAAAGTGTCCAGCAAGGAATATCAGCAACCAAAACAGactccaccaccacccccatGGGGAGGATTTTGCATGAAGTGGCTCTGAATGAATCTATTCGATATGCTGCTGGTGATGATGTAGAAAAGTGGTTGAACAGCTTGTTGTGTTTGGATGCTACTCTTGCACCATGTATTAGTGCTGGGTGCCCTGTGCCTGATAGCTGTGAGCTATACTATGTCAATAGAGACACACTCTTCTCATACCATAGAGCATCTGAAGTGTTCCTACAGCGACTGATGGCTTTGTATGTTGCATCACACTACAAGAATACACCAAATGATCTTCAGCTGTTGTCTGATGCGCCTGCTCATCACATCTTCTGTCTTCTCGGTCCAGTTGATCCTTCGACTAAAACACTGCCTGAAGTTTACTGTGTACTACAGGTTGCCCTTGAAGGAGAAATATCCAAGTCAACCATCATGAACAGCTTATCTCGTGGCAAAAGAGCTTCAGGTGACCTTATTCCCTGGACAGTCTCACAACAGTTTAATGATCATGAGTTTGCCAGCTTGTCTGGTGGAAGAGTTGTACGGATAGCAACACATCCTGACTTCCAAGGGATGGGTTATGGAAGACGTGCGTTACAACAACTTATTCATTATTATGAAGGAAAGATCCCAAACCTGTCAGAAAATGGTCATGAGAATACCAAAGAAATAGCTGTGAAGGACGATGAGGATGTTGGCCTAATGAAAGAGTCAATAAGTCCACGAGAAAACCTTCCACCATTGCTCTTAAAGTTAAGCGAGCGAACAGCAGAAAGACTAGATTACCTTGGAGTATCGTATGGCTTAACCTCTAACTTACTCAGGTTTTGGAAGAGGAGTGGCTTTGTTCCAGTGTATTTGAGACAGACACCtaATGATCTGACAGGCGAGCATTCTTGTATTatgctgcgcatgctcaatgagAGTGAGATGGATTCTAGTGAAGACTGGTTGCGTGCCTACTGGACTGATTTTCTTCGtcgttttctatctcttttgtCCTACCAGTTTCATATGTTTGACTCGTCGCTTGCTCTCAGTATTTTACAACATAAATCAATGAAAGCCAACAAAAAAGTGATCTCCAAATCTGAGCTGGAGCATTCTTTAACAAAGTATGACATCAAACGCTTGGATCTGTACTCTAAGAACATGGTTGACCATCACTTGGTGACTGATCTTATGCCTGCTAATGCCAGACTCTTTTTCCTGGATAAATTAGACTTTTCTCTTTCTGCTGTACAATCGGCAATTCTTCTCGGCATTGGCTTGCAACACAAGTCTTTTGAAGATCTTGAGaaAGAACTTGACCTTCCAGCTAGTCAACTTCTTGGCCTTTTCAACAGAATTGCCAGAAAACTTGTCAAGtGTTATAATACTGTTCTTGAATCtgcaattgaaaatgaaattgtaaaacaaaaggAAGTGAATATGGAACCTCTGGCCAAGACTCTGAACCAAGACTTGGATGAAGCGGCTATAGAAATGGAGGCCAAGCAAAAGAAGGAGCTGGAACAAATCAAAGAGCTTGATTTGTCAGAGTATGCTATTTCTGGGAAGGATGAAGAATGGAGTACTGCTCTTGGAGGGAAAGAGAAACAACATACAATTGTTAGCATTCCAAGCAGCAAGAGAAAGACCAAGcCTGAAGAAGAAACAAAATCAGCTAAGAAACAGAAGAAATCTAAGAAACACCACAAAAAGAAATGA

Transcript

EGACTEQ4350013854-PA

Protein

Uniprot

Uniprot term	Description
Q9H0A0	RNA cytidine acetyltransferase OS=Homo sapiens OX=9606 GN=NAT10 PE=1 SV=2
Q8K224	RNA cytidine acetyltransferase OS=Mus musculus OX=10090 GN=Nat10 PE=1 SV=1
Q55EJ3	RNA cytidine acetyltransferase OS=Dictyostelium discoideum OX=44689 GN=nat10 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13725	tRNA_bind_2	Possible tRNA binding domain	Family	Interproscan
PF13718	GNAT_acetyltr_2	GNAT acetyltransferase 2	Family	Interproscan
PF05127	Helicase_RecD	Helicase	Domain	Interproscan
PF08351	TmcA_N	tRNA(Met) cytidine acetyltransferase TmcA, N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027992	Domain	Possible tRNA binding domain	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR033688	Family	RNA cytidine acetyltransferase NAT10	Interproscan
IPR000182	Domain	GNAT domain	Interproscan
IPR007807	Domain	Helicase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032672	Family	TmcA/NAT10/Kre33	Interproscan
IPR013562	Domain	tRNA(Met) cytidine acetyltransferase TmcA, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10925	N-ACETYLTRANSFERASE 10	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0008080	Molecular Function	N-acetyltransferase activity	Interproscan
GO:0016072	Biological Process	rRNA metabolic process	Interproscan
GO:0034470	Biological Process	obsolete ncRNA processing	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0030686	Cellular Component	90S preribosome	Interproscan
GO:1904812	Biological Process	rRNA acetylation involved in maturation of SSU-rRNA	Interproscan
GO:1990883	Molecular Function	rRNA cytidine N-acetyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14521	NAT10, KRE33; N-acetyltransferase 10	EC:2.3.1.-	Ribosome biogenesis	ko03009	deepkoala