Gene detail

Detailed information of EGACTEQ4350015139-PA in Actinia equina

Genomic Location: WHPX01001187.1:1079061...1081738
NR annotation: KXJ20824.1, putative S-adenosylmethionine synthase 4 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350015139-PA

GTTCGATGTTCTGATTACGATCACAACATTTACCGGTGCGCTTTGCGGGGGTCTGGGTGGATTGCTCACTTTTAACATTACGAATGAAACCGAAAATCTTCCGAGTTCTTTCGGACGAGTTCGAAGTGACGTTTTTTGGATCTTCAAAACACTACGAACAATTTCCGAAGCTTCTCAAACAAACATTGGCTACGGGCTCTCGTGTTACACCATACTTGGACTGAACTGCCTTACTCATCATTTCAGATACAAGCCGAATAATCAGTTTAATTTCTTCGAGAAAACTGGTCGTACTGTGGAAATTTACTTTGCTCATCAGATAATGCAGTCGTTTCGACTTTTTGCAAGTAAATCTCTCGTGCGACCGCTTTGCAGCAGACCAACTATTTTGAGCACAACAACACCTCGTGTCTTGGCAGCGAGGAATGTCTCTGGTCCGTACAGTACAGGCGATAGACATAGCTTTCTTTTCACCTCAGAGTCAGTAAACGAAGGCCATTCTGACAAAATGTGTGACCAGATCTCCGATGCTGTGTTAGATGCTCACCTAGAACAAGATCCCCATGCGAAAGTCGCATGCGAGACAGCTACAAAAACTGGATTGGTGTTGTTGTTTGGAGAGATAACCTCTGGTGCTCATGTTGACTACCAGGCCGTCGTGCGGAGCACAGTAAAAGACATCGGCTATGTGGACTCGTCCATGGGATTTGATTATAAAACTAGTAGTGTTTTGTTGGCCATCCAAGAGCAGGAGAAAGAGATCGCTGATAGCGTTCATGTTGGGAAAAAAGACGAAGAAATGGGTGCCGGAGATCAGGGGCTAATGTTTGGCTATGCAACAGACGAAACAAAGGAACTTATGCCACTAACAACCGTGCTAGCACACGATTTATGTGCAAGGCTATCAGAATGCAGGCGAAAGGAAATCTTACCGTGGTTACTACCCGACGGTAAGACGCAAGTTACTGTCGAATACAACTTAGAGGGTGGAGCTTGTATACCACAACGAGTTCACACTGTACTCATCTCTACTCAACATACCATAGACGTTGGAATTGAAGAGATAAGGCATCATCTCCTGGAGACAGTTATAAAACCAGTCGTTCCGGAGAAGTATTTAGATGAAAATACAATCTTGCATTTGCTGCCATCTGGCAAGTTCTTGAGTGGTGGCCCAATTGCTGATGCTGGTCTTACAGGTCGCAAGATCATCGTGGATACCTATGGTGGGTGGGGTGCACATGGTGGTGGTGCATTCTCTGGAAAGGATGTCACCAAAGTTGACAGGTCTGGAGCCTATGCAGCAAGGTGGATTGCAAAGTCATTAGTTGCGGCGGGGCTCTGTAGACGTGTGCTAGTGCAAGTTGCATATGCTATAGGACTTGCTGAACCATTGTCTGTTGCCATATTTAGTTATGGATCAAGTGAATATACTGATGATCAACTCCTTAAAGTTGTTCTGGACAATTTTGATCTTCGCCCAGGGATGATTATAAGGGAGCTGGACCTCAGAAGACCCATCTATAAAGCTACTAGTGTTTTTGGACATTTTAAGCCAGGGTTTCCATGGGAAGAAGTAAAGCCACTGAAAATAGAGTAGACCGATACAAGTTCAATTCACAGGCGTTTCAAAAACTTTCTTTTATCCCTGACATATATTGTCATAATACATGCATTATAATCTCATTACATTTACTTTAATACAGGAATATTTTATACCTGGATTAATTTTCAAGTTTTGTATCTTCTTATGCTTCATTGAAGAAAATCATCGTTATCCCTTCATATTTAGTTGCATGCAACTCGAATTTAAATAGCATAGATATGAATTAGTAGAATTCATGAAATTGTAGCTACATGTACCcactttaatatttttacaaatattctaTTCATTAACCATTGAGTATACCAAATCATTTCAACATAGCTATAAACTAGTGCATGCCTATATTTTTTATACTCATAGTATTAGTTATTTGAAACCTCAGCCTTTCAATGCATGTGTATATCAGCAAGAAGCTGTATCAACATTAGCAAGAATAGCTAGAAGCTATGGAAGCAAACATTTGATTGAGAAAACATAGAGCTATAcattcaaacaaaaacaatgctATACTTAAAATTAGGATTTTCCTATATGCTTGAACCACCATACTTCAAGATTTGAATTAGTGAGGTCTGTATCAAAGTTTTTTCAAATCCTGGCATActcaatcaaaataataatagctCAACCACATGATTGGATTCAATTGCCATGTTTCATAATGATgccacatcaaaacaaactgtTGTTTTAATGCTAGGGATCATGGTTGCTAGAGGgggatggaatgacaacaacacatcttaaatcacaatgaaatttggtttatgagctggtgaGCTTCAAGTGAGCTGGTGAAAGCAAGAACTACTAAATATTGAGCTAAATATCtcaaaagaagagaattaagcttaaaggggcacttggatgaaaacgccccaattttagAAAGTCCtaataattgaagtatatgaGGATGATATGACTCCATTATGTTTACGTTAgccagattagtgaaaatttttaacattttaagcagccacttgctattgagatattttggttcaaaaccagaaagaacaatagggttgagtaaatgacattatttactccaaatttagatgctgaa

Protein

Uniprot

Uniprot term	Description
P50305	Probable S-adenosylmethionine synthase 3 OS=Caenorhabditis elegans OX=6239 GN=sams-3 PE=1 SV=1
P50306	Probable S-adenosylmethionine synthase 4 OS=Caenorhabditis elegans OX=6239 GN=sams-4 PE=1 SV=1
Q00266	S-adenosylmethionine synthase isoform type-1 OS=Homo sapiens OX=9606 GN=MAT1A PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00438	S-AdoMet_synt_N	S-adenosylmethionine synthetase, N-terminal domain	Domain	Interproscan
PF02773	S-AdoMet_synt_C	S-adenosylmethionine synthetase, C-terminal domain	Domain	Interproscan
PF02772	S-AdoMet_synt_M	S-adenosylmethionine synthetase, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002133	Family	S-adenosylmethionine synthetase	Interproscan
IPR022628	Domain	S-adenosylmethionine synthetase, N-terminal	Interproscan
IPR022631	Conserved_site	S-adenosylmethionine synthetase, conserved site	Interproscan
IPR022636	Homologous_superfamily	S-adenosylmethionine synthetase superfamily	Interproscan
IPR022630	Domain	S-adenosylmethionine synthetase, C-terminal	Interproscan
IPR022629	Domain	S-adenosylmethionine synthetase, central domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11964	S-ADENOSYLMETHIONINE SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004478	Molecular Function	methionine adenosyltransferase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006556	Biological Process	S-adenosylmethionine biosynthetic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00789	metK, MAT; S-adenosylmethionine synthetase	EC:2.5.1.6	Biosynthesis of various plant secondary metabolites	ko00999	deepkoala