Gene detail

Detailed information of EGACTEQ4350015298-PA in Actinia equina

Genomic Location: WHPX01000087.1:808213...810233
NR annotation: XP_031558578.1, carbohydrate sulfotransferase 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

EGACTEQ4350015298-PA

CTGAGGAGTGCAAGGTATGATCTGAGACGTCTCAtttgaaagaaattaaagacgaGAGCTTGGCTGtaagataataaatatttttcatttttgaaaatgttattATATTTCGAAAAGAAGAGAACAGTATGTAAAATGTGTAAGATAAAGTTATTGTTGaagcaaaatattttaccaGTTCATTGCTTCTTGTATTCGAAGCTCCTCCTCACGATTCGTTGACTACTTTGAGGTTTTGGGTCATCGGTCTGAAGTAAATTTTTGGTTTGACTGCCGCTTCGTAATGCTTGATCAACACGTGTCTGGTGGCTGGACTGAGAAAATCAACAGACTATGGAAAAACTTTAAATAAGTAGTGTTTTTGCTTTTAACCAGTAGCTAGTCTCAAGACAGACAGCAGAATTATAGAAATCCCTTTCTTTGACACGCAATTCTACTAACGAAGTTGACAGTGAGGAGAGGTAACTGATAGAGAATTAACGACAGcatcaaattgtttttttttatttccaggCAAGGAGACAATGAAATTACACGACTAAGCGGTTTTTACTTTACTTATTCAGTGACGCTTTCCGCCCCTTGATACCGTAGTAGACCAACATGCCGCTGTTGGCTATGTTCGTGGCACGGGCCATGATGATTCTCGCAGTCATTGGAAGCTTTTCCATGTATTTCTACGTGACCGTTCTGCGATTTTCCCCTCTATTGGGTCGACCTCGGGTTGTCTATCTACGACCACCAACTTTTCAATGGGACAGAGCTGATCATAGGAATGTTATAGTAGTCACTGACTCACCTATTTATCCCAACATCATTGGGGATCTGTTCAACCAACACCCAAAAGTCTTCTACATTGAACAGCCTCTTTACCCATTTGAGATGTTCAGGAATCTAAACTACACGCGCAAAAGCGAATATAACGGTCAAGTCAGAGCATTCCTGGACAACTTATTTCACTGTAGATTAAATGGCTATAGGGATTACTTGACGTTTCTGTCGCATCCAAGGCTTTCCTCGCCTCGTTTTCGATTGTCAAGCAAAGCCCTATCCTCTCCTCCCTTGTGTAGAAAAGAGGTGAGCACTTACACAAACGAGAGTGATTTCTTGAAGGACTGTCCGTTGCTGAACGCCAAATGGGTTTCCATCGTTTGCGCAAGAAAAATGCATATTGTTTTATCATTATATGCCAAGAGAGCTCCTGGAGGGGTACTCGCGGGATTGCTCCCTCTAATGACGTCGCAGTCTATGGCTACCAGGGTTTTACACCTTGTGCGGGATCCTCGAGCAGTTGTCTGGGAAATGGTCGACAAACACGGACACTCTGAGAAAAACTCACACCAACTCACCACGCTCGAGAATAAAATCATGAAGCGCTGTATCCAGTTAAACATGGATTCGGATTTCCTTCGATCACTACCTAGCGATCTGGCACAACAATACCAGATTATAAGATACGAAGATGTTGGTAGAAATCTCGTGAAAACAGCAGACACTGCCTTCAAATTTGCTAGCATTGATAGAACCGCAGAGGTAAATGAGTATGTTAAACGTCAAAAAACTggtattaataatgatgatgatagcagtTGGAGACTTGCGATGGACATGAGAACTGTAGCTATGATAGACCAACACTGCGCTCATGTTATAGAAAAACTCGGTTACAAACCGGTTTTAAACGAGCGTACGTTAAGAAACTTGAACTATTCTCTTTTAGATTACAAAGTAACGTAGGAAACGAAGGGTTATCCGCATTTAAATCCGAAGTAAACGAAACTTACTGGTTTAAGTCCAATAATTTCCAGGTGCAAATATTTCTGCTTCATTATACTGTAATTTATCTGCGCCGTCTCCTACATGCGGTTCTCTTCATCCCAAAGCATCCATGCAGTGCTGCTTTTAGTCGTGTCGGATTCAAAAATCGAATACTCTAAATCGATTGCATATTGAATATATGTAGACGAATACGGTTAACAGAAACGAGTGAGGGTTAGGAACTTTAAAAGTAAGGGgcgggg

Protein

Uniprot

Uniprot term	Description
Q9R1I1	Carbohydrate sulfotransferase 4 OS=Mus musculus OX=10090 GN=Chst4 PE=1 SV=1
Q8NCG5	Carbohydrate sulfotransferase 4 OS=Homo sapiens OX=9606 GN=CHST4 PE=1 SV=2
Q9GZX3	Carbohydrate sulfotransferase 6 OS=Homo sapiens OX=9606 GN=CHST6 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051135	Family	Gal/GlcNAc/GalNAc Sulfotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10704	CARBOHYDRATE SULFOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001517	Molecular Function	N-acetylglucosamine 6-O-sulfotransferase activity	Interproscan
GO:0006044	Biological Process	N-acetylglucosamine metabolic process	Interproscan
GO:0006790	Biological Process	sulfur compound metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01022	CHST1; keratan sulfate 6-sulfotransferase 1	EC:2.8.2.21	Glycosyltransferases	ko01003	deepkoala