Gene detail

Detailed information of EGACTEQ4350015588-PA in Actinia equina

Genomic Location: WHPX01000762.1:216273...231029
NR annotation: XP_031554913.1, E3 ubiquitin-protein ligase rnf213-alpha-like, partial [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350015588-PA

ATGAAGTGTTTAAACCCAGAATGTCCAGCTCCTTTGTTTCTCGAGTCTCTTGGACATGAAAGCATCAAATTCTGTCCAATTTGTGGTTGTTCGGTCGAAGCATCGCTGAAATCTCCCGAGAACAACCAGAATAACGAAAAAAGTAACCaaacagaagaaaaaggaagcgAAAGAATATCTCTTAAACAAAataagaaTGGGACAACAGTTACACTAGTGGCCAGTCATAGCAGCCCCTCATCTGAACCAAATGGCAGAGATGAAAACCTGCTGGATCAGGCAGTGCTGATGGTGGTACTGAGAGATGCATCTGATAGATCATCCAGTGCTGATTACGAAGATGGCAAAGAgggcaaagatgccaaagacagcaaagatgccaaagacaGCAAAGATGACAAAGACAGCAAAAATGCCAAAGACAGCAAAGGTGCCAAAGGGGGCAAAGATGCCAAATacagcaaagatgccaaagaggGCAAAAATGCCAAAGAgggcaaagatgccaaagaggGCAAAAATGCCAAAGACAGCAAAGATGCCAAATacagcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaagagggcaaagatgccaaagaggGCAATGATGCCAAAGacagcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaaatacagcaaagatgccaaagaaggcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaagagggcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaagagggcaaagatgccaaagaggGCAAAGATTCCAAAGacagcaaagatgccaaagacagcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaatacagcaaagatgccaaagacagcaaagatgtcaaagacagcaaagatgccaaagacagcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaatacagcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaatacagcaaagatgccaaagacaGCAAAGATGTCAAAGACAGCAAAGATGCCAAATACAGCAAAGATGCGAAATACAGCAAAGATGACAAAGacagcaaagatgccaaagagggcaaagatgccaaagacagcaaagatgccaaagacagcaaagatgccaattacagcaaagatgccaaagacaGCAAAGATGCCAAATACAGCAAAGATGCTAAAGAgggcaaagatgccaaagagggcaaagatgccaaagaggGAAAAGATGCCAAAGACAGCAAAGGCGCCAAAGACAGCAAAGGTGCCAAACAGGGCAAAGATGCCAAACAgggcaaagatgccaaagaggGGGAAAAATTCAAAGAGAGCAAAGAaagcaaagatgccaaagacaGCAGAGTTGCCAAAGAGAGCAGAGGTGCCAAATCGGGCAAAGATGCCAAATCgggcaaagatgccaaagacaGCAAAGGCGCCAAAGACAGCAAAGGTGCCAAACAgggcaaagatgccaaagaggGGGGAAAATTCAGAGAGAGCAAAGAgagcaaagatgccaaagagAGCAGAGGTGCCAAAGAgagcaaagatgccaaagagACTAAGCAGGACAAAGACAGCGAAGGCGCCAAAGAGGGCAAAGATGGCAAAGAGGTCAAAGAAAGTTTTCAAGCCTCCACTGGTGACGGTAGATCAAGCTCAGATGATAACTACATGACAATAGTACTACACGCCTTGTTGGCTCCTCACTTCCAGTTTGACCCAACCCAAGACACAGTCGTTGTCCGTGGTGGATTCCCAAATTTGAGTGGATGGCAAAAGGATCATTTACAGATGATACCTATTAGACCACTTCCTGGTGGCTACATTGTTATAGAAGGAATTACTACCATCCTGCTTAAAAATGCAAGGGAAAAAATCAATTACAAGTATCTTGTTTTAAGGACATATGATAACAGCGAGATGTGGGAAGAACTGATTGACTGTTATTTCAGCAATAAAGACCCCGTCAATCGCTGCTTTTCTATTCCAGAACATTATCGAAAGCCAAAGGGCGTATGGCACCAATACGACGATGCAGTCTTCAGTCAGCCTAAGTTTGGGAATCTATTCGCAATAACCTACCTTACTGGAAAGTCATGGACCCCCATGAGGGAAGAAAATTAG

Transcript

EGACTEQ4350015588-PA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
PTHR47819	DENTIN SIALOPHOSPHOPROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005518	Molecular Function	collagen binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0071895	Biological Process	odontoblast differentiation	Interproscan
GO:0097187	Biological Process	dentinogenesis	Interproscan