Gene detail

Detailed information of EGACTEQ4350017045-PA in Actinia equina

Genomic Location: WHPX01000052.1:489816...500640
NR annotation: XP_031560773.1, BTB/POZ domain-containing protein KCTD9-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350017045-PA

ATGGCCAGCAATATCCCCAAAAGAGCCgttatttacaagcatggtatTCTCTCTTCAGGCGAGCTTGTTAGTGTTCCCAAAACGATGCAAGAACTAGAACGACTTGTCAAAGAGAAACTCCAGCTGAGCTGTGTAGAAGGGATATATACATCTAAAGGAGGCCGTATTGATAATATAGAACTAATAAGGGATGATGAGGTTTTATATATAGCATCTGAAAAACCAGCATCAAACAACATCTTCTTTGCTCCTTCTCTTCTACatcaacaaacaagcaaaacagATGAGTTGATAACAAAATCATACAGTGATTGGGTGACGCTCAATGTAGGAGGACAATTATTTACTACAACAAGAGCTACTCTGTTATCAAAATCTAACAGCATGCTTGCCAAGATGTTTTCTGTCACAGACTCTTGGTGCAGCATCAGAGATCCAAGTGGAGCATATATGATTGACAGGAGCCCAGTGTACTTTGAACCTATTTTGAATTACCTGAGACATGGCTGTGTGATTCTAGATGAAGGAGTCAACCCCAGAgGTGTTCTTGAAGAAGCTAAGTTTTTTGGCCTTACAGGTATGATGGAGGAGCTTGAAGAAACTGTCAAGaaaatagaaaaacttCAAGATGAATCACTTAGTAGGAATGAGTTTGTGCGGATTTTGCTGTCGACACCTTCAACAAGAGAACTGAGATGCCAAGGTATCAATTTAGAAGGTGCAGATCTCTCCAACTTGGACTTGCGGCACATCAACTTTAAGATGGCTAATCTAAGTCACTCAGACTTAGCTGGAGCAAACCTGTCACATTGTTCATTAGAAAATGCTAACCTCTCTTATGCTCATTTGGATGGAGCCATCTTGGGGAATACTAGATTTCAGAGAGCCAATTTAGAAGGAGCTTCCTTGCGAGGATGTAACTTTGAAGATCCTACAGGAGTACAGGCTCATCTTGAAGGTGTGAATCTCAAGGCTTCTGATTTAGAAGGTAGTCAAATGACAAACGTCATTCTACGAGTTGCAACTCTAAAAGGAGCCAATCTCCAGAACTGTAACCTAAGAGGGGCAATACTAGCTGGTGCAGACCTGGAGaaCTGCAATCTGAGTGGCTGTGACCTCCAAGATGCTAATCTTCGAGGAGCAAATGTCGTAGGTGCCAAATTTGCAGAGATTTTGGGTCCCCTGCACATGTCCCAGTCTGTAGGTGCATATTTAGttCATCCTGCGCCTCCCTATCGTCGGCTGTGTCCCCACTGCTCCCGCCTCCGTTCCGTTGTACCAGTTTTCCTTGTGCTTGCATGTAAACCATCATCTAGTTCAGCCATTAAATCTACCATGCCATTGTTAACTACAGTAATTGGTTGCTTCCCCAAGCCAGAATACCTCCAAATACCCGACTGGTTTCGTAAAATGGAAACTTTCTTAGGAGACTACTCAAGGTTTAAAGTTGAAGGCCTTGGGTCCAAAGACCACTTGGATAATGCTTTAAAGAAAGCAACTACAGAGGTTTTAAAACTTCAGGAAGAAATAGGAATCGATGTCATTACAGATGGTGAAATGGCGAGAGAAAATTACGTGTATTATTTTTGCCGTAGAATAAAGGGAATTGATTTCATAAAACTGACAGAGAAAAGTTCTCGTAACGGGGCTTGGGTAGCCGACCTTCCGACCATTGTTACCGAAATTGAAGCAATGGACAAGGAACCTTGGGTTCACGTCGAGTGGAAAGAATCTCAAAAGGTAACAGAACGGCCAGTGAAGATTACGATTCCCGGTCCAATGACTATTATAAATTCAGTCTGCGATACCTACTACAAAAACGATCGTGAACTTAGTAGTGTTTTAGTCAAGATTATTAACAGAGAAATACAAGCCCTGGTGGCCGCTGGATGTCAGTATATTCAGGTTGATGAACCAGTGCTGGTTCGTTTTCCAGAAATAGCCCTAGAATATGGAATAGACCACTTGGCAGCCTGCTTTGAAGGGGTACCTAGCACTGTTAACAAATGTGTGCACGTCTGCTGTGGATATCCCCATCATCTTGACGACGAGAATTACCCTAAAGCAGACCCTGGCGCCTACTTGTTGTCGGCTGACAAACTTGATCAAGCTGGTTTTAATCGGATTTCAATAGAAGATGCACATCGTTACaataatttgaaattatttaaGCACTTCAAGAAATCTAAGGTACatggttgtggtggtgacGACAATGGCGAtgctgctggtggtggtggtgacgatAATAGTGgcaatgatggtgttggtggtgacGACAATGGCGAtgctgctggtggtggtggtgacgatAATAGTGgcaatgatggtgttggtggtgacGACAATGGcgatgctggtggtggtggtggtgacgatAATAGTGgcaatgatggtgttggtggtgacgacaatgatggtaatgatggtgataatgacgaTGGTGTTGACGTtcgtgatgataatgacgaggGTGGTCgggatgacgatgatggtgatgatgtggatgatgatgatgatgatgatttcaaTGTTtgtaatgatgttggtgatgatgatgacggtggtgatgatgtggatgatgatagtgatgatgatgctgatgaccgTGTAATgttggggatgatgatgatgaagattatcTGA

Transcript

EGACTEQ4350017045-PA

Protein

Uniprot

Gene family

Uniprot term	Description
Q7L273	BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens OX=9606 GN=KCTD9 PE=1 SV=1
Q80UN1	BTB/POZ domain-containing protein KCTD9 OS=Mus musculus OX=10090 GN=Kctd9 PE=2 SV=1
A5PKG7	BTB/POZ domain-containing protein KCTD5 OS=Bos taurus OX=9913 GN=KCTD5 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01717	Meth_synt_2	Cobalamin-independent synthase, Catalytic domain	Domain	Interproscan
PF02214	BTB_2	BTB/POZ domain	Domain	Interproscan
PF00805	Pentapeptide	Pentapeptide repeats (8 copies)	Repeat	Interproscan
PF11834	KHA	KHA, dimerisation domain of potassium ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR002629	Domain	Cobalamin-independent methionine synthase MetE, C-terminal/archaeal	Interproscan
IPR021789	Domain	KHA domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR051082	Family	Pentapeptide repeat and BTB/POZ domain-containing protein	Interproscan
IPR003131	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan
IPR038071	Homologous_superfamily	UROD/MetE-like superfamily	Interproscan
IPR001646	Repeat	Pentapeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14136	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003871	Molecular Function	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0009086	Biological Process	methionine biosynthetic process	Interproscan
GO:0051260	Biological Process	protein homooligomerization	Interproscan