Gene detail

Detailed information of EGACTEQ4350017058-PA in Actinia equina

Genomic Location: WHPX01001167.1:51053...88499
NR annotation: XP_031572905.1, fasciclin-2-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

EGACTEQ4350017058-PA

ATGATAGCTTTACAGCTGCGAATCGTGTACACTCACACTCTCTGGTTTTCGATTGTTTTGCATTTACTTCCTCACGAAGTGATGTGTGATATAAAAACCCCAGCTAATCTCATACGAAATATCAGACAAGATGCAGTCTTCATGTGGAATACGACGAATGGTAACAGCGTCTTATCAGTGGCATGGGGTTTGCTTCAAAGCAATGGAGATATCAAACCAGAGTTTATATACATAAGCACTAGGACAAATGGTCCAATATTTCGACCTGATCTAGACACCACTGCCGTAAGGTATAAAGGAAGAGTGAGCTGGGTTGGTGATTTAAGTGCAGGACATGCTTGGTTCAAAATAACGAACCTGACAATCCAAGATACGAACAAGTATGTTGCAGGAATACGAGAACAAGGGCAGAGTGGGACATCTAAGCACGATACAAGTCTAACTGTTGCAGCTATTCCAAGTTTTCCACATTTCCCAACTTCACCATACCTTGTAAAAGTTATTGAAGGCAGAAACCTGGTAATAGATTGTACAGCCATTGGACCTCCAACACCTACAGTACAATGGTTTACAAGTGATGACACAGTAATAACTAGTGCATCAGTAACAGGGACTGTTACATTAACCAAAACAAATGTAAAAAGAAGCCATAATGGAACCCAATACAAATGTGTGGCAAGTAACAACCCAAAGAGTGACCCAGTTTCTACAATGATAAAGGTGGTAGTACTGTATCCTCCCCACATCACCATTACTCCTCCAAGTATCACAGTTGTAGAAGGTGATGAGATCGTACTCAGCTGTACAGCAGATGGTTATCCACCACCATCCATATCATGGACGAAGGCTGACGGTGTCATCAAAGCTGGTCACACAGTAGCTGGGGGAACACTTAGAATACCTGATGCTATCAAAACAGACGCTGGCAAGTACATATGTACAGCAAAGAACGCCTATGACAGCAGGGAACATGTCGACAATGCAACCTCCACTGTCGTAGTTATATACCAGCCCTCGATCATGTTGGAAAAGTTACTTAACCAAACCGTGAATGAGACAGACTCCTTGAGTATAAAATGTGATGCAGATGGCTATCCACCACCAACCATCAAATGGAAGACACCAACAGGATCTTTTTACACTGGGAATGTCTACAACATCCCGTCAGTCAGCAGATCACATGCAGGGACATACACATGTTCAGCTAGTAACGGGATAGGAAGACAAGCAATGGCCAGTATACAAGTTGCTGTGCAGTGTAGTTCCAAGTCGTGGAATGGCAACAGTATTCATCTCAGATGTTTTGCAACTGGTTTACCTGCACCACGGATATCAtggtacaaaccaacaaatcaaCAGATCACTAGAGGTGTCAACATTGTACCCGGGGGTAGTGAGGTAACAGTACAGACAACTGCTGACCAAGGGGACTATGGGCAGTACAAATGTCGGACAACAAACATCCTGGGAAGTGATGAGCACGTCATCAATGTCACTCAACTGTttCCTCCAAGTCCTCTTGTTATAGAAATAACTGAGCTTGAAGCATCATCTATAACTGTTAGATGGACCACACCTGCTGATGTTGGTGGACTCGTTGTCACTGGTTACTTACTGGAAGTCAGTACCCAGCCCCcagtgatcacagtgaatacccaTTCTGTTATATCAAGACTGAAAGCAAACACACTCTACACTGTCAAGGTCTGTGCCAGGAATATTGTTGGGTATGGAGTGGTGTCTTCAAAAGTTATCAAGACAAAGAGAATCGGCAAACCTTCAATCCCTCACCTGATATCAACTATTCTCAATGGTAAAGACTCTAAGCTTTCCGTCGTCTTGAGGTGGACAAAACCAGATGACAATGGTGGTAACATAACGCGCTATACCATCTATATCaaggaagtgaaacataaagcTGATTGGATAAAATATGATGACGTCAACGATCCACATCAAGATGGCTATAGAGTAACAAAGAACATTGTCTATGGAAAAACATACATGTTTATGGTATCTGCATGGAACAAATATGGAGAAAGTATGAGGGATGAAGGAAGTACCAAGACTGTAAATACTACAGCAGACGAAGCAACGACTACAAATGCAATGAATTATTGTACTGAAGAAGGATCAAAGTCTTCTTCTACAGCCATGGGAGTTATTATTGGCATTCTCGTTCTATCTCTTGTTTTCAACCTATTACTTATTGTATATCTAAGGAGAAGGGTCCAACTAAGCAGTAAAAAAGAAAGCCAAACGCATAATAACAGACAAACACAGAAGAAAGCTGTTGCTGGGGAAAGTTATCATAACGACTTGGAATTGGAAGAAAAGGTTACAACAGCAGTTACGGCATCGCGTCTTCCACAGCCTGTCCAAACAGTACCAGAATATGAAACCATCCATCAATCAAATCCTAACGAGGCAGGCTGTTCTAATGATATCAGTAATTATCAAGGACTTAATCTGATGCCAAACACGTGTATTCAAGGTGCGCAAGAACCCGTGTACGAGCCCCTTGGTACAAGATCATCGAAACCCAATCTGCCGCGTAATGATAATGAACAACATCAATATGAACCCCTGAATATTGGAAACCAAGACTCTACCTATCAATCCCTGCAGACTAATAGCAGGGAGTCTGCCATATGA

Transcript

EGACTEQ4350017058-PA

Protein

Uniprot

Uniprot term	Description
P13590	Neural cell adhesion molecule 1 OS=Gallus gallus OX=9031 GN=NCAM1 PE=1 SV=3
P13591	Neural cell adhesion molecule 1 OS=Homo sapiens OX=9606 GN=NCAM1 PE=1 SV=3
P13595	Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10075	BASIGIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0070593	Biological Process	dendrite self-avoidance	Interproscan
GO:0098632	Molecular Function	cell-cell adhesion mediator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06491	NCAM, CD56; neural cell adhesion molecule	-	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala